Report for 2790.m00136

 > 2790.m00136, length: 543, copies: 1 

MSKIAPLHLTNPSSTPLLSLPSLRPIPIGKGIPISVAAAAHAQAGLGRTGPVLGFCIADGPETACDVAQQDGYTV

THSLRRFSLDPFLSSSSVRRRQGKWSHRGCGGGGAAASGASSLLPLPPVRSSCSASHISPNPRRSPLFPGGNHAA

ASRNSLLPRSLIIYFGVLSNVFGYWILSLEKMRTAIPHTPNDEEMVWMTSYMIYFVLVISLCRICRRKKYKIHDA

GDLQQENMFSVLNFDGGNAYEQIIEATENFSEKYCIGAGGYVSVYVAKLSNGKNFAVKKINATENGRLINEQMFY

REIEATMQIRHKNIVKVFGYCCTARDKFIVYKYMKGGNLLTALKSYRSASELDWKRRLCIAQDVAHALSYLHHDC

SDPIVHRDVTTKNILLDLEFRACLSDFGIAKILDADGSGHTRLAGTKGYLAPELAYTTKVTEKCDVYSFGVVVLE

LLMGSHPGDFVSSISCPSKKSTPMKDLLDTRLPPPAGEVASEIFGLITVAIQCLHPNPSTRPTMPSAIHLFSKFS

RAVDLDYLHADIMEFCLL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	255	519	6.2e-45
Ser/Thr pkinase [Pfam ls]	255	522	9.1e-45

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	202	457	2e-31
Rpg1 [Hordeum vulgare]	244	522	8e-29
Pto [L. esculentum]	246	514	2e-29
Rpg1 [Hordeum vulgare]	252	523	6e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	160	179	in -> out
putative TM domain	194	211	out -> in

Report for 2790.m00136

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)