Report for 2806.m00126

 > 2806.m00126, length: 1788, copies: 1 

MGPSGREGSGEEVNLEVANMGEAASTEEGDADAIKEDEAASTEEGDADATKEGEASTAEVEMKDPKIHTRSSPNS

VILAAQELSSDARNVVITAGFEQLLYMSLEGFGNREILRFLMNNTHTEQTSEGVEIKIEGSKLPPITENVVAHVV

GVPEGSGESLEFEQDTKKQGEIKKAVHNLLKLPDSVDDCEPIADEKKRDRKHKTIMNGKIGVDYLRDVMEEAKET

KDVELEVKCFFFIAFHTLLLPEKDGYLTLHQMQAGMNLARIQRINWRKVLLNHLKDGVKSWWKSQAKSTKPGAKS

TKPGGVASVYISGPVTVLLLYYLDFLKSKSESDVSQTPRICYYGESMVTDLVQETMQKDGKRFDNLKFRTTEETC

YSRSYNECEKVKVQKVSGKQKKNKRTRLGKNKGEKGDKEEKGTHVNPAVRRKEVVKRYGERAEKDSGAKNDMVAH

IPALEDFVKSSLEHMPRYLHSDAIKIVKQNHSSIVEMYEKIMKTQSQMPSKMESLVDRYKDLDEFYSKHIMSKAD

WEQKHFGNKAAVDINGITIAEHDFVKSMKLNGWISNFIVDVQCSIWREEEEWKDKIILSQSAVNELLGLTLIRGY

VEKELSNLAKKKQIFVPILIRALDGSGLHWYLLVVDIENGIRSDCGFYMLLYMERFGRMKIDDINENDVLMYRKK

LVKDIYENPNNNPKDVSDEVIAQDEYHILDDTICLSPPPSDLRNSPPRPNLTVSPMSHEDGRNDGPLPPSSPGTS

DGNKNLEDAQPQEEADRSSVGIDLDKLKSKRFLIVFDDIWEHDFSKAASTKRFSKTEWEKLLAPFGPGETNGNMV

LVTTRFPKVAETVKKGANQVDLHGLEPDEFWDFFQLCAFSETQDDNDKEKLFDIGKQIAKKLKCSPLAAKTVGPL

LRKKPTRKHWMEILEKEEWLKQKDGDDSIITALKISYDYLPFYLKKCFSYLALFPEDYEFDSLEISCYWDSIGII

NSSGKNDTIEGIGSQYLNELYDNGFLMKGDDNHYVMHDLLHELSQIVSSRECANINYSSFRADDILPSIRHLSIT

IQDKYTESFKEEMEKIKKRVDIRNLRSVMIFGSYRSRRIANVVRDTLNEIRALRVLFIFMNSPHSLPDNFSKLVH

LRYLKIGSPWGFKVCIPSTVSKLYHLKFLDLKSWGGSNNNLPNDFNRLINLRHFLAKKEFHSNVPEVGKMKCLQE

LKEFHVKKDKIGFELAQLGQLEQLRGELCIFGLKNATREEAIEAKLKHKSNLSKLRLDRGGNREKNTSSSSSRTQ

VVSNENQDDDIILDSLQPHSNLTELSIVNLGGGMAPSWLGSNIIHLDTLHLDGLERLDCISCPKLNELPLSSCSS

SSCTMWFPKLRRLNITRCLELSVPLVPHTSTLTYVRVNDSVRGFNTSKKLTLDGYNGALAFQNLGNLEEIYIGDV

HNMSLIDFQQLRSLRRLTVTLCRDTFLRGLDEHVVVVFNSVRVLNLSGFLLTRKMLSNLFRCFPALYVLSMSPSK

ESHEEVKLQIPSSCSLKTIRLFKCKNLILPPLDDGQGLVNLTSLRNLHIDDCGKIFSQWYMGKPAQTTSNPFPSS

LLELSICRESRIHSMALLSNLTALTSLQLIDCCNVTMDGFNPLITSNLNKLCISSCGSAPADLLAEMARTKTTMP

QVAFQLKDLVVDSISAVLTAPICSFLAPTLHELGIKDDVDRVSSFSDEQEGALELLVSLKKLSFDGLWVLQSLPE

GLHKFPSLTELSISHCPQIQSLPKNGLPTSLETFSVFICSSALEEESKRFTEEKERYYSESDD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	685	980	9.5e-13
NB-ARC [Pfam fs]	777	980	3e-35
LRR [Pfam ls]	1732	1753	0.12

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	1328	1352	6.6
LRR [sensitive, ls]	1328	1352	130
LRR [sensitive, ls]	1359	1383	4.2
LRR [sensitive, ls]	1359	1383	83
LRR [sensitive, ls]	1465	1489	3.1
LRR [sensitive, ls]	1465	1489	60
LRR [sensitive, ls]	1515	1539	6.5
LRR [sensitive, ls]	1515	1539	130
LRR [sensitive, ls]	1708	1731	1.1
LRR [sensitive, ls]	1708	1731	22
LRR [sensitive, ls]	1732	1753	0.0059
LRR [sensitive, ls]	1732	1753	0.12

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	774	1224	1e-21
I2 [L. esculentum]	775	1764	5e-71
Xa1 [Oryza sativa]	775	1723	1e-80
RPS2 [A. thaliana]	777	1157	1e-14
Mla1 [Hordeum vulgare].	777	1225	8e-20
Pib [Oryza sativa].	777	1198	4e-20
Xa1 [Oryza sativa]	1296	1773	4e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2806.m00126

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)