Report for 2806.m00130

 > 2806.m00130, length: 590, copies: 2 

MQALLIFAILAVLAGVVQGQQWCQPFSCGHLSNISHPFWRRGDPHRCGVSSYELECSSGKATIQINTGTYYVTSI

NYNDSSFWVVDANLQDANSNCPLPRSNHRPFIWGIPGPSYTRELTLQGIWWATFVNCSQAVKNNNKYIHVDCQNT

SSSFVYVLNVAPYYALMENLEPSCGYLAMIPVSWTPASGKKYQYFAELMRKGFSVRFPFVLDHPTAFELIKQCLN

RSIRFVLAPLALLTFLAQRYWKTRITIDAVEKFLRMQLMLGPTRYTYTDIIAMTSHFRDKLGQGGYGSVFKGVIL

PGDVYVAIKMLDNYNCNGEEFISEVSTIGSIHHVNVVRLVGFCAEEMRRALVYEYMPHGSLDKFIFAPEKSFSWD

KLNEIALGIARGINYLHQGCDMQILHFDIKPHNILLDSNFVPKVADFGLAKLCPRDNNYVPVSAARGTVGYIAPE

MISRSFGVISSKSDVYSFGMLLLEMAGGRRNSKQNMSSSTQVYYPSLVYNQLIQQEMGEITNTLNMHELERKLCV

VGLHCIQVKPPDRPTMSEVIEMLEGDVDGLQLPSRPFFCDDEPLPLLVDSYRFSSELTEISEEDG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	280	476	2.1e-50
Ser/Thr pkinase [Pfam ls]	280	550	1.5e-47

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	269	549	2e-37
Rpg1 [Hordeum vulgare]	269	549	1e-25
Rpg1 [Hordeum vulgare]	278	548	2e-31
FLS2 [A.thaliana]	286	548	1e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2806.m00130

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)