Report for 2808.m00162

 > 2808.m00162, length: 508, copies: 1 

MDTFFSAVLGDLLSRSISFMIDRYKQQQQSVEEESRLQQLHRVLLRIEAIVEEADGRLITNRAMLQQLGMLREMM

YRGYYFLDGFRYRIAQPHAQDEVGDLSPFSPLKRFCISTRDRKTTISEILEKKELQEMLGRLKTVVSDMQEFVVL

VSGYPRMKRQPYCSYLLLENCMFGRQIEKERIINFLLAPHPLGDEEDIDVLPIIGPGRVGKSTLVEHVCRDERVR

EYFSTTVFYGPDSIGDGDLAPLTDTGAIKHRNPASSKLSLAIIELVDEMDDETWRRILQSLRSGDHVAPVSKIII

TSRSNKIATFGTTKALHLGFLPKEDFWYFFKTVAFGSTNPEEEPKLASICMEIAAVLNGSFMGLNIVASILNSNL

SAQFWYSLLKRLKFFTYRHIHLLGEHPRDLYNANSGRTYIWMHENYCGDSDLVTYNYYQVNSARLNGLQTVLTSR

DILTGTVKPQAAKYEVLEWQSSIPPYISYITQYEILAQQKLMLPPKRKRSGALSEELV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	157	228	8e-06
NB-ARC [Pfam ls]	157	427	2.7e-07

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	7	385	5e-18
Xa1 [Oryza sativa]	164	385	6e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	126	146

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2808.m00162

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)