Report for 2808.m00163

 > 2808.m00163, length: 500, copies: 1 

MDAFFSAVLGDLLSRSISFTIDRYYRQHQGVEENLRKLHRMLLRIQAIVEEAHGRQITNQAMLLQLRMVRAVMYR

GYYFLDNFRYRTVQAHAQDEVGDRSLGLSPFSQFKRFCFSTRTRKIASEVLDQKELQKMLGHLENIVSDMQEFVA

FVSCYPHMSRQPYCSYLLLENCMFGRQIEQERIINFLLEPNHPSAKGINVLPIIGPGRVGKSTLVEHVCHDERVR

KYFSMIVLCSADSIGGGFLTDTGLIKHRNPTSTGQSLVIIELADDDMDDRTWARILHNLRGEHITPVSKIILTSR

SDKIRAFGTTEALHLDFLPKEAFWYFFKTIAFGSRNPEEEPKLASICMEIATLVKGSFMATHVIGGILRSNLSAQ

FWCRFLKCFRHYTDMHISVLGEHPSDAYTKTSGLTYIWTSRNMSVVAATYSLHQASSAQLADLSPILSNDVLTGD

VEPPEKFDALEWRSSIPPYYNYISHYEILAQPPDMLPKRKRSRSLSEGLV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	158	228	3e-06
NB-ARC [Pfam ls]	158	424	3.4e-07

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	7	382	1e-18
Xa1 [Oryza sativa]	165	382	9e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2808.m00163

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)