Report for 2808.m00164

 > 2808.m00164, length: 491, copies: 1 

MDTFFSAVLGDLLSRSVSFLINRYHQQQKDAEENQQRLHRVLLRIEATVEEADRRCITNQAMLLQLRMLRDVMYR

GYYFLDSFRYRNIQAHAQDEVGDHSLGLSHFCPLKRFCISTRTWKILSQVLEKKELQEMLDHLQGIVSDMQEFVV

LMSSYPRMSRQPYGSYLLLENCMFGRQIEKERIINFLLEPHRPAGSKGIDVLPIIGPCRVGKTTLVEHVCHDEMV

RKCFSKILMYGADSIECGELVPLTEIGVIKHRNPASTGQSLLIIELVNDMDNETWTRILHRLRGDHSTPVGKIII

TSRSNKVATFGTTEALQLDFLPEEEFWYFFKTMVFGSANPEEEPELAAICMEIAALMNRSFMGTYIIGDILRSNL

NPQFWYKFLECFKYYTDIHIRELGEHPTETYKRISGHTCVWTPENRCVTEATYALTYTLYQASSEDLNDQPMVLA

SDVLVGNVQLQGKVDVLQWRSKIPPYYCYMAHFEIISILVY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	158	423	5.2e-06
NB-ARC [Pfam fs]	173	229	2.9e-07

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	4	384	8e-13
Xa1 [Oryza sativa]	114	380	9e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	127	147

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2808.m00164

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)