Report for 2814.m00146

 > 2814.m00146, length: 909, copies: 1 

MANFRGFRRAVIVVVLCICHVNVVRGQSTDPAEVNALRAIKGRLIDPMNNLKNWNSGDPCTSSWKGVFCDNIPIN

NYLHVTELQLFKMNLSGTLAPEIGLLSQLKTLDFMWNNLTGNIPKEIGNIHTLRLIGTFSIKYPNQLLIDSTIRE

MCRQLIVVAYFHGTLNGNQLSGSLPDEIGYLQNLNRLQIDQNEISGPIPKSFANLTSMRHLHMNNNSLSGQIPSE

LSRLPELLHLLVDSNNLSGPLPPELAETRSLQILQADNNNFSGSSIPAAYENIPTLLKLSLRNCNLQGGIPDISG

IPQFGYLDFQNNSLGNIPAAFEPPEEVTILLYGNPVCTNSTPARAARLCQPTSVTEAPSGQGSQVSINCSPCPTD

KNYEYNPSSPLPCFCAVPLGVGFRLKSPGISDFRPYKEDFQKNLAHLLVLADYQIYMERYIWEVGPRLNMHLKLF

PNNTNLFNTSEVVRLRHLLAGWEITLSNVFGPYELLNFTLGSYEDEFPTVASSGLKRGALAGILAGTITASIAAS

VFTTIFIMRRRSKRRTTSRRSLLSRYSVKVDGVRCFTFDEMAAATNDFTDSAQVGQGGYGKVYKGNLTDGTAVAI

KRAHEGSLQGSKEFCTEIELLSRLHHRNLVSLVGYCDEEDEQMLVYEFMPNGTLRDHLSAKSRRPLNFSQRIHIA

LGAAKGILYLHTEADPPIFHRDVKASNILLDSKFVAKVADFGLSRLAPVPDVDGTMPAHISTVVKGTPGYLDPEY

FLTHKLTDKSDVYSLGVVLLELLTGMKPIQHGKNIVREVNTAYQSGEIAGVIDERISSSSSPECVARLASLAVKC

CKDETDARPSMADVVRELDAIRSALPEGEELLPEYGDQSATSTSLTATGPLSSSSTTGALFISSGSGGHANSKSG

IPSGTVAPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	183	206	0.064
LRR [Pfam ls]	207	230	0.067
LRR [Pfam ls]	280	302	1.1
Ser/Thr pkinase [Pfam fs]	573	840	5.6e-51
Ser/Thr pkinase [Pfam ls]	573	840	2.4e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	79	102	1.7
LRR [sensitive, ls]	79	102	33
LRR [sensitive, ls]	103	126	0.88
LRR [sensitive, ls]	103	126	17
LRR [sensitive, ls]	183	206	0.0032
LRR [sensitive, ls]	183	206	0.064
LRR [sensitive, ls]	207	230	0.0034
LRR [sensitive, ls]	207	230	0.067
LRR [sensitive, ls]	231	254	3.3
LRR [sensitive, ls]	231	254	65
LRR [sensitive, ls]	255	279	0.59
LRR [sensitive, ls]	255	279	12
LRR [sensitive, ls]	280	302	0.054
LRR [sensitive, ls]	280	302	1.1
LRR [sensitive, ls]	303	325	0.91
LRR [sensitive, ls]	303	325	18

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	27	320	5e-25
CLV2 [A. thaliana]	30	342	3e-20
Xa21 [O. sativa]	36	296	1e-19
Xa21 [O. sativa]	50	296	8e-26
Cf-9 [L. pimpinellifolium]	53	334	1e-18
Xa21 [O. sativa]	61	320	2e-19
FLS2 [A.thaliana]	64	334	1e-20
FLS2 [A.thaliana]	68	348	5e-24
FLS2 [A.thaliana]	68	353	1e-17
FLS2 [A.thaliana]	74	847	6e-66
FLS2 [A.thaliana]	74	348	3e-18
Cf-9 [L. pimpinellifolium]	75	334	5e-16
FLS2 [A.thaliana]	80	348	1e-22
CLV2 [A. thaliana]	83	334	2e-17
CLV2 [A. thaliana]	83	267	7e-15
Xa21 [O. sativa]	90	298	1e-18
Cf-9 [L. pimpinellifolium]	100	247	6e-11
FLS2 [A.thaliana]	169	321	1e-11
Rpg1 [Hordeum vulgare]	514	846	4e-42
Xa21 [O. sativa]	525	672	2e-11
Pto [L. esculentum]	561	844	4e-64
Rpg1 [Hordeum vulgare]	561	846	1e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	510	532	out -> in

Report for 2814.m00146

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)