Report for 2826.m00115

 > 2826.m00115, length: 492, copies: 1 

MSSDSNSISSALSQTTPVLRLRVWVLIAIGIGILMAILFIIALWLSMRRKKKTAVGFDGRSHMEIPIVSKDINVD

RVDAQSLHDSGTPIMPVQDKYEQMKGVSHLAESRSVDVDAFSQCSSVYNIEKAGSSYSEDYSSSGPGRKGSSSYG

YASASPLVGLPELSHLGWGHWFTLRDLEYATNRFAKSNVLGEGGYGIVYKGRLMNGTEVAVKKILNNVGQAEKEF

RVEVEAIGHVRHKNLVRLLGYCVEGIHRMLVYEYVNNGNLEQWLHGAMSGGILTWENRMKILLGTAKALAYLHEA

IDPKVVHRDIKSSNILIDDEFNSKVSDFGLAKLLNSDSSYINTRVMGTYGYVAPEYANSGMLNEKSDIYSFGVVL

LESVTARDPVDYSKPADETNLVEWLKMMISSKRAEEVVDPNLEIKPPKRALKRAILVGLKCVDPDADKRPKMSHV

VQMLEAVQNAYRQDQKRPSSQMGSVDVESQQSAEEISNSADS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	184	454	7.5e-55
Ser/Thr pkinase [Pfam ls]	184	456	2.3e-54

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	172	465	1e-33
Pto [L. esculentum]	172	455	6e-56
Rpg1 [Hordeum vulgare]	172	486	6e-41
Rpg1 [Hordeum vulgare]	172	457	7e-30

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	21	43	in -> out

Report for 2826.m00115

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)