Report for 2838.m00155

 > 2838.m00155, length: 825, copies: 1 

MEIAVGALSGMVDALPAKLGDLLQQEYTLLSGARGDVGFLQSELGTMNAALLRCESLESSDVQTRAWVAQVRDLA

YDIEDWIDLFAHRVDGGAAASPGAAAATSSSSSSGGFLSWVRCCVNKVTTLPARHVIATELQELKNRVIELSEQR

KRYRFDPPARHAGGRSGVAAVDPRLVALYADTSSLVGLDAPVKKVSEMVVDDGTTGLKVVSISGMPGAGKTTLAT

AVLRRLKEENKFHCSAFVSVGQKPDIVGKTLKGILSQIGNGYAGGEDIGRLIGMLRDELKDKRYLIVIDDLWGRT

EWSTLKCCFRDDNLGSRIMVTTRNDELAKECSSNSDESVYKTGLLSDADSKDLFSNKAFGKGKDCPNHLKDLYDI

IVERCGGLPLAISSVAGALAHRFSKDEWERYESNLLPSSHSDELNLKQILNLSYNDLPSHLKSCMLYLSIFPNKY

EIDVERLVRRWIAEGFIADARHASKEETARSYLTDLISRNLIQALHLRHNGTPSCYTLHPVIHDFIVVKSMEENF

VTVLDAKKEALSTNNGTVRRLSLQNSVKQDLAGARNDMIKHARSVTVFGHANGVPRLNDMSVLRVLDLEGCNGPL

CLDGLCKLILLRYLNLRGTDVSELPAQIGELRCLETLDVRSTKVKELPASIVSLEKLMHLLAGNAKLPGEISKMN

GLLTLSCANVWKNTGSVLPELADLANLRELELFCDASEISGDNKTRVSFSSDGFKRLKQLSIQGSLPSVAFVNSS

LRKVEVLELKYEKGISDGSNGVSGIEHLPSLKHVLIEFSQKDAGATATIASVRNAAEMVHPNHPDVSVKVDGKAI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	170	472	1.9e-68
NB-ARC [Pfam ls]	170	472	5.3e-69
LRR [Pfam ls]	610	632	4.1

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	610	632	0.21
LRR [sensitive, ls]	610	632	4.1
LRR [sensitive, ls]	633	655	1
LRR [sensitive, ls]	633	655	20

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	712	5e-94
RPM1 [A. thaliana]	9	714	2e-64
Pib [Oryza sativa].	47	338	2e-11
Pi-ta [Oryza sativa]	61	820	6e-76
Xa1 [Oryza sativa]	135	737	1e-32
RPP5 [A. thaliana]	171	452	5e-13
L6 [L. usitatissimum]	178	446	1e-12
Pib [Oryza sativa].	180	663	1e-56
I2 [L. esculentum]	181	745	8e-45
M [L. usitatissimum]	181	446	9e-17
N [N. glutinosa]	184	453	4e-15
RPS2 [A. thaliana]	184	643	7e-29

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	134	154

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2838.m00155

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)