Report for 2861.m00187

 > 2861.m00187, length: 685, copies: 1 

MDTPLLLLLPFLAACLLAPRHAAEAAVTSCAPRRCGNVTIAYPFWLPDSSPPPSSSSAPCGPAAFQVNCDNGSRA

SLARSFRSGYKILGVSYANRTVVVANDNVQTDASGCPVPKIDVSASLTLAPFTASPANSQLVFLFNCTSSSRPPP

AGFVNVTCPGAKAVVRLDTSYNNTAARVVAGGCDYAAVPVVGVPGASPTDYPQLLRGGYMLEWRAPAGDCMACNA

SGGQCGYDADTEAFACICSDGSSRPGICGWLELTKGNAKKSGNKVILIVSLSICATGLVLLACIAIVYKCRRRMQ

NRFSFLNAMDGASRTDTAKVEKLLQSYGSLAPRRFRYSELKKITKSFSQRLGEGGYGTVFSGTLADGRAVAVKFL

HHSKPNGEEFLNEVVSIGRTSHVNIVSLLGFCLEGSKRALVYEYMPNGSLDKYIYSTSAAAAAEAEEAEATASPD

RDVLGWKVLQEIAVGVARGLEYLHDGCNTRIIHFDIKPHNVLLDEGFRPKIADFGMAKLCNPKESILSMADTRGT

IGFIAPEVFSRGFGDISTKSDVYSYGMLLLEMVGGGSNVKAYAEKGASGTFFPLWVYDHLLEDGGVLQSVAAAAA

ATAGGGAGSPGGEEIARKMALIGLWCIQTVPANRPSMGKVLEMLERSVHELAMPPRPYHSNSSSPSRPSSYPSSA

SDFTQRSVSC

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	345	558	2.8e-49
Ser/Thr pkinase [Pfam ls]	345	646	1.9e-44

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	269	644	3e-30
Rpg1 [Hordeum vulgare]	288	568	1e-26
Rpg1 [Hordeum vulgare]	310	560	1e-23
Pto [L. esculentum]	334	645	2e-36

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	270	292	out -> in

Report for 2861.m00187

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)