Report for 2876.m00140

 > 2876.m00140, length: 1876, copies: 1 

MRPCVPRLGSARYRRKCSGGASPGVGVDAKRLQVKKQRDANCATKNLFGGQTGKASDILVEHANRKEKLSWTCSC

GLWKATTHHLPSALCHGLNYVNCAMWYTTSICVAASPPDLHLASISQSHIPVDRVHCESAIPSMSGIGGMIASSV

ANRVASRLSELVVEEATLLWRFKDDVDDMEEKMRDLEAVIQDVDGKARQGGKDGEAERRWLNKLKSVAYDVEDVL

DELDAAQLIKNHQPKLKLFLSRNNPLLRKMTIARNMKNSREKIVSIKKDSIKLHHVHRELVAEGSRDNETFADDG

DVDIGMLGRDAETKKIINLLLNTEAKEDISIIPIVGLGGLGKTTLAQAVFADKRVNVFDLRIWVYVSKEFDLLKI

GKAIIRGANRSINLDNCNLQFVNNNLKKELANRRYLIVLDDLWEEYGENLEKLKQMLQHGGKGSKIIATTRSGSV

VQVLYTGYLANERKVCPVPEPDHINLGVLSPYDCWSVMKRRVFGPDDGQNGLEEIGRQIAEKCGGLPLVANALGQ

VMSEHRTVEAWTDIRDRKIVLDFKADHQQDTIERLMLSYYYMKREFKMCFTYLAAFSKGFVMDTDRLIQQWIALG

YIEARDNGQRCVNYLLRMSFLQISKSSMVSPMHTKAPRKLTMHDLVHDLATIIAPDEFLVMDATMPNTWSKANNK

RYCRHAQLVNYQKQPKFFKDLPSKVRTIHFRECIGSQLPRKAFSGSKYIRILDLSGCSSEGQSIPVSMALPSSIR

QLMLLAYLDVSGLPIAALPKYLHMFQNMQTLILSNCSLETLPANIGNLHKLCYLDLSGNSDLSKLPTSFGNLLKL

SLLSLSGCTKLEELPESIHNLKCLEQLDMSGCCALQNLPDEFGSLSKLSFVNLTSCSKLTKLPGNFNLESLEHLI

LSDCHELENLPEDFGILYRLEVLDLSDCYKIPVLPESFCQLKHLKDLNLSDCHGLKQLPECFGDLSELQFLNLTS

CSKLQSLPQSLCNIFKLKHLNLSYCIRIEHLPSLFGDLQLQVLNLTCCYSLRDMPDSISDMASLTLLDVISGTKG

VLDKAWSIKECLNLPGREEHDVHEIENGECCSIVELGKLSCRALGIQHLENVERLDNAREAKLRDMTDLRELTLS

WGLGGTRNVDKDEEDFPNWVSGISSYLPCLIYLCLSNLATCDSLPAFGRLPNLRFFCMKNMPTIRKIGREFYDGE

GNCKKLRIIWLERMDNFEEWWTTRSGEEDREFLIPNLHFLKAVDCPKLSFLPYPPRSMHWSLDNSDKVLPERGFG

SLASSTLPFRVVINNCKYPPDMWVRFQHLATIEIFQVEGCSGLRTFPDILQSFVSLRELYLCSWENLEILPEWLG

QLICLEVIEFINCPVLTTLPTSLQNLTSLRELLLRGCKGLETLPEGMGRLISLEKFIIMDCPKLTFLPESMKNLT

ALIELHLDGCKGLETLPEGLGLLISLKKFVISNCPKLTYLPESMKKLATLIELRLDGCKRLETLPKWLGLLISLK

KIVINNYPMLTFLPESMKNLTAMKVLYLYGCKELEILPEGLGMLISLEKFVLIDCPKLTFLPESMKNLTALIELR

LDGCKGLEILPEGLGLLISLEKFIINNCPKLTFLPESMKNLTALIELWLDGCKGLEILPEGLGLLICLEKFIIMD

CPKLTFLPESMKNLTALIRLLLDGCKGLEILPEWLGMLVSLEEFIIIDCPKLTFLPSSMKNLTAITELRLDGCKG

LEILPEGLGLHIPLKRFVINDCPMLTFLPELLGHLTALKCLDIQSSPNLTYLPESMKNLTALEELWLEGFNSLPE

WIGQFIYLKEISIFDSPNLTSLPESIWNITTLELLYIYFCPRLAEWCQREDANKISRIPKIMLDGEIFIPGQAID

G

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	292	607	7.6e-45
NB-ARC [Pfam fs]	306	607	6.1e-47
LRR [Pfam ls]	777	799	0.025
LRR [Pfam ls]	800	823	0.18
LRR [Pfam ls]	824	847	0.11
LRR [Pfam ls]	848	871	0.14
LRR [Pfam ls]	895	918	1.8
LRR [Pfam ls]	919	942	0.077
LRR [Pfam ls]	943	966	0.23
LRR [Pfam ls]	967	990	8.4
LRR [Pfam ls]	991	1011	6.5
LRR [Pfam ls]	1014	1037	6.8
LRR [Pfam ls]	1378	1398	7.3

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	777	799	0.0013
LRR [sensitive, ls]	777	799	0.025
LRR [sensitive, ls]	800	823	0.0093
LRR [sensitive, ls]	800	823	0.18
LRR [sensitive, ls]	824	847	0.0056
LRR [sensitive, ls]	824	847	0.11
LRR [sensitive, ls]	848	871	0.0071
LRR [sensitive, ls]	848	871	0.14
LRR [sensitive, ls]	872	892	1.7
LRR [sensitive, ls]	872	892	33
LRR [sensitive, ls]	895	918	0.089
LRR [sensitive, ls]	895	918	1.8
LRR [sensitive, ls]	919	942	0.0039
LRR [sensitive, ls]	919	942	0.077
LRR [sensitive, ls]	943	966	0.012
LRR [sensitive, ls]	943	966	0.23
LRR [sensitive, ls]	967	990	0.43
LRR [sensitive, ls]	967	990	8.4
LRR [sensitive, ls]	991	1011	0.33
LRR [sensitive, ls]	991	1011	6.5
LRR [sensitive, ls]	1014	1037	0.34
LRR [sensitive, ls]	1014	1037	6.8
LRR [sensitive, ls]	1154	1176	5.9
LRR [sensitive, ls]	1154	1176	120
LRR [sensitive, ls]	1306	1329	5.8
LRR [sensitive, ls]	1306	1329	110
LRR [sensitive, ls]	1354	1377	0.73
LRR [sensitive, ls]	1354	1377	14
LRR [sensitive, ls]	1378	1398	0.37
LRR [sensitive, ls]	1378	1398	7.3
LRR [sensitive, ls]	1402	1425	4.4
LRR [sensitive, ls]	1402	1425	87
LRR [sensitive, ls]	1426	1449	0.52
LRR [sensitive, ls]	1426	1449	10
LRR [sensitive, ls]	1450	1473	1.2
LRR [sensitive, ls]	1450	1473	24
LRR [sensitive, ls]	1474	1496	0.62
LRR [sensitive, ls]	1474	1496	12
LRR [sensitive, ls]	1522	1542	2.4
LRR [sensitive, ls]	1522	1542	47
LRR [sensitive, ls]	1546	1569	3.7
LRR [sensitive, ls]	1546	1569	73
LRR [sensitive, ls]	1570	1593	2.7
LRR [sensitive, ls]	1570	1593	53
LRR [sensitive, ls]	1594	1617	0.71
LRR [sensitive, ls]	1594	1617	14
LRR [sensitive, ls]	1618	1641	3.5
LRR [sensitive, ls]	1618	1641	70
LRR [sensitive, ls]	1642	1665	6.1
LRR [sensitive, ls]	1642	1665	120
LRR [sensitive, ls]	1690	1713	3.3
LRR [sensitive, ls]	1690	1713	65
LRR [sensitive, ls]	1714	1734	2.8
LRR [sensitive, ls]	1714	1734	56
LRR [sensitive, ls]	1738	1761	5
LRR [sensitive, ls]	1738	1761	99
LRR [sensitive, ls]	1762	1785	0.85
LRR [sensitive, ls]	1762	1785	17
LRR [sensitive, ls]	1807	1830	1.9
LRR [sensitive, ls]	1807	1830	38

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	142	1419	2e-64
RPM1 [A. thaliana]	146	997	1e-42
Mla1 [Hordeum vulgare].	146	968	7e-46
RPS2 [A. thaliana]	176	1030	7e-40
Pi-ta [Oryza sativa]	210	881	2e-19
M [L. usitatissimum]	254	959	4e-11
N [N. glutinosa]	306	1044	9e-29
Pib [Oryza sativa].	306	1005	2e-27
Xa1 [Oryza sativa]	308	1030	2e-48
RPP5 [A. thaliana]	317	1411	1e-27
Xa21 [O. sativa]	648	1013	4e-12
FLS2 [A.thaliana]	718	1171	2e-22
FLS2 [A.thaliana]	724	1007	5e-12
RPP5 [A. thaliana]	727	1120	3e-20
Xa1 [Oryza sativa]	729	1023	5e-11
FLS2 [A.thaliana]	732	1044	7e-16
Xa21 [O. sativa]	741	1007	2e-11
Xa21 [O. sativa]	741	1022	2e-11
RPP5 [A. thaliana]	755	1052	1e-21
N [N. glutinosa]	776	968	5e-16
RPP5 [A. thaliana]	776	1189	8e-22
CLV2 [A. thaliana]	824	1044	3e-12
I2 [L. esculentum]	881	1659	3e-32
Xa1 [Oryza sativa]	883	1844	2e-22
RPP5 [A. thaliana]	933	1555	3e-25
N [N. glutinosa]	1297	1571	3e-14
FLS2 [A.thaliana]	1304	1833	8e-15
L6 [L. usitatissimum]	1304	1619	2e-13
RPP5 [A. thaliana]	1307	1834	7e-31
FLS2 [A.thaliana]	1324	1838	3e-15
L6 [L. usitatissimum]	1324	1703	7e-12
Xa1 [Oryza sativa]	1330	1755	8e-17
FLS2 [A.thaliana]	1344	1835	1e-19
FLS2 [A.thaliana]	1345	1835	9e-16
FLS2 [A.thaliana]	1345	1822	2e-11
N [N. glutinosa]	1422	1721	4e-11
N [N. glutinosa]	1450	1787	7e-13
N [N. glutinosa]	1566	1845	1e-10

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	171	199

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2876.m00140

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)