Report for 2900.m00130

 > 2900.m00130, length: 949, copies: 2 

MELTAGAMSLLLKKVCELLMAELNLDKKLTKSIGDLRTELTMMHGVVRWIGEVPPEQLDGQVRLWARQVREISYD

MEDAVDAYLVRVADGEPEAAKQNRRLSESLKRAARLFTKGRALHQIAGAVEEAQGRGKSLSDLRQKYGGLKLHGA

GEGCAAIDPRLTALYVEVAKLVSVDKARDELSELLLSSSGGSMQQQQQLRTVSVFGFGGLGKTTLARAVYESIRE

QFDCAAFVSVSRNPNITKIFRKLLFELDREQYSDINDLDRDDVQLIDELRSFLQSRRYLIVIDDLWDENVWKFIK

CVLYENNLSSRIITTTRKINVSKACCSSGDDKIYEMKRLSDDDSKKLLYTRIFTHENNCPHELKQVSTDILKKCD

GVPLAIITIASLLAGNNNRPIKTKDQWHNLLNSIGRGLTVGEGVDDMQKILSFSYYDLPPHLKTCLLYLSIFPED

YEIERDRLIWRWIAEDFVQCENNWDNLFEVGESYFNELINRSMVEPVGIDFEGRAQACRVHDMMLDFILSLSKEE

NFITIIDDSEHRTSWQHKNDNKIRRPGVNSMPSLSLFQVLRVLDLEGCDLSKFSNLNLRHVGKLSHLRYLGLRRT

YIAELPTEIGNLKVLQTLDIRGAHGIRELPPAITGLRQLMCLRLDWDTRLPRNGGLATLTSLEEMTGLRVRRDSA

DGVVRELRCLKKLRVLRLQWGEMEHGAGRAVVGALGELQGIQSIEIYAYGGGGGGVGNVGDGWVPPACLRRFVSN

GPTSAFSALPAWVRCSPLPRLAFLDVWVDRVRRGDIGVVGELPALQSLRLRATGRIDARPAVERFAVRAGAFPCA

AACALLHFVTAPSMFPRGAMPRVRRLSFSLRAWDFAAAGDGGGGGGLRLGLRDLGMQNLPSLEDVRVEVWYKNTG

DGGGSAVTRKVEEALRRVAAVHPNRPAINIRRRKMTTGSAQSDSSTLSI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	156	473	1.5e-54
NB-ARC [Pfam fs]	202	473	2.2e-56
LRR [Pfam ls]	591	613	6.4
LRR [Pfam ls]	614	637	8.5

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	564	587	0.51
LRR [sensitive, ls]	564	587	10
LRR [sensitive, ls]	591	613	0.32
LRR [sensitive, ls]	591	613	6.4
LRR [sensitive, ls]	614	637	0.43
LRR [sensitive, ls]	614	637	8.5

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	943	1e-176
Pi-ta [Oryza sativa]	27	619	8e-65
Pib [Oryza sativa].	62	351	1e-12
RPM1 [A. thaliana]	70	721	1e-54
Xa1 [Oryza sativa]	119	721	1e-29
I2 [L. esculentum]	133	667	7e-41
RPS2 [A. thaliana]	133	670	2e-25
L6 [L. usitatissimum]	164	528	2e-12
M [L. usitatissimum]	166	447	3e-11
Pib [Oryza sativa].	167	928	7e-64
N [N. glutinosa]	171	663	8e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2900.m00130

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)