Report for 2931.m00166

 > 2931.m00166, length: 541, copies: 2 

MGCFTVLRSKKKKPLALTKKSVDARESTSSRLPEPEAHVPSLQSAPPSFRNKAKIHQSEKKASYSRARVLSAPSS

LIVVDQDGLPYAEFDDQDDSRGKGGSIKGHRFSNPLPLPLPSPEGKSLRNFGSFKAINASGPLDASGPLPLPPKK

CDGLKNFSYEELSSACQWFSGDQCVSESLTSTSYKASFRDDFTDPKTIEAIVSRLLSSTQSLKEFKTQVNTLASL

QHPNLCKLIGFHAREESNERMLVYERLHHGSLDKLLFGRSDGRFMDWSARLKVALGAARGLAFLHDEGPFQAMYN

DFSTSNIQIDKDFTAKLSGYGCVGFNTEEEISNASVAAANLSVETLEKGVLTPKSNVWCFGVVLLELITGRKNLD

VRSSKEERNIVKWSRPFLTDDSRLSLIMDSRIKGRFPTKAARIVADIILRCLNKDPSERPTMRAVVESLASVQDI

KVPCRYPLQEPSAAPRKVMLKSTSLNGIIHHHPVVTFSPSPPSRNQHLLSPRSSTSALLPPRTSCALDDPRVSSI

KKSPSPILRRSGVEGF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	173	446	1e-11
Ser/Thr pkinase [Pfam fs]	222	293	4.4e-08
Ser/Thr pkinase [Pfam fs]	344	444	1.2e-08

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	154	448	1e-15
Rpg1 [Hordeum vulgare]	155	451	4e-18
Pto [L. esculentum]	157	444	2e-28
Rpg1 [Hordeum vulgare]	213	451	1e-10

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2931.m00166

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)