Report for 2945.m00109

 > 2945.m00109, length: 530, copies: 2 

MPIPIAFLFLLPLLLAASSHATASSHATASVVPQPRGFYINCGSEKEEQIGSIKWIQDEGFIAVGNMSAVDKPNI

LPLLATVRYFPDATARKYCYQLPVVKGSRYLVRTTYFYGGFDGGDVPPVFDQIVDGTRWSAVNTTDNFRRGMSTY

FEMVAEAQGKTMSVCLARRADTRSSPFISALELVSLDDSMYNTTDFDKYVMSTVARSRFGAKGEIVSYPDDQYNR

YWAPFTDANPTVESHSAITPEEFWNVPPAKALRAGVTTSRGKKLSVQWPPVELPAATYYVALYFQDSRTASPYSW

RVFDVAVNGKEFFRELNASAAGVMVYSTMMPLSGKMEIVLTPNETSPVGPLINAGEIYQIVPLGGRTATRDVVAM

EELARSIKNPPPDWAGDPCLPRQNSWTGVICSEGSPVRVVSLDLKNHGLSGSLPDSIGNLTGMKNIYFGGNKLTG

SIPDLSSMHILEELHFEGNQLSGPISPSLGTLTNLKELYLNNNNLTGQIPESLKNKPELDMRKIQFDDEGRRAKA

SETVG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	437	459	8
LRR [Pfam ls]	460	483	7.4
LRR [Pfam ls]	484	507	0.0044

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	413	436	0.6
LRR [sensitive, ls]	413	436	19
LRR [sensitive, ls]	437	459	0.26
LRR [sensitive, ls]	437	459	8
LRR [sensitive, ls]	460	483	0.24
LRR [sensitive, ls]	460	483	7.4
LRR [sensitive, ls]	484	507	0.00014
LRR [sensitive, ls]	484	507	0.0044

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	398	518	4e-11
FLS2 [A.thaliana]	399	514	5e-12
Xa21 [O. sativa]	400	503	8e-16

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2945.m00109

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)