Report for 2945.m00115

 > 2945.m00115, length: 718, copies: 1 

MGRADAPWLPLLLLCSSCCFCIWPQKQILVAADTDPNDVTVLNTLFTSLNSPGQLKGWQASGGDPCGQSWQGITC

SGSSVTAIKLPSLGLSGNLAYNMNTMGSLIEIDMSQNNLGGGQQIQYNLPTNKLERLNLAGNQFTGNLPYSIFSM

SNLKYLNLNHNQLQGNITDVFSSLYSLTTLDLSFNSLAGDLPQGFTSLSSLKKLYLQNNQFTGYINVLANLPLDD

LNVANNHFTGWIPSQLKKINNLQTDGNSWSNGPAPPPPPYSAPPPPNRPNSPGQNNGGSSSGGSSGIGGGGVAGI

IISLLVVGAVVAFFVIRRRKRRAALEEHFEQHQPFTSFPSNEVKDMKPIEESTTIDVESLPSPASFSLKPPPKIE

RHKSFDDDDLSNKPVLKKTNVAPIKATVYSVADLQMATESFSMDNLVGEGTFGRVYRAQFTGGKVLAVKKLDSTV

MPFHSSDDFAELVSDISKLHHPNLNELVGYCMEHGQHLLVYDFHRNGSLHDLLHLSDEYSKPLSWNSRVKIALGS

ARALEYLHEICSPSIIHKNFKSSNLLLDSEFNPHLSDAGLASFISDAEFQAAQQSAGCTAPEVDMTGQYTLKSDV

YSFGVVMLELLTGRRPFDSTRPRSEQSLVRWATPQLHDIDALDRMVDPALKGLYPAKSLSRFADVLALCVQPEPE

FRPPMSEVVQALVRLVQRANMTKRMLDGDTSSRRTDDQEQDFI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	128	151	1
LRR [Pfam ls]	152	175	0.038
LRR [Pfam ls]	176	199	0.025
LRR [Pfam ls]	200	222	0.15
Ser/Thr pkinase [Pfam fs]	416	618	1.1e-31
Ser/Thr pkinase [Pfam ls]	416	689	7.4e-32

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	103	125	1.5
LRR [sensitive, ls]	103	125	48
LRR [sensitive, ls]	128	151	0.032
LRR [sensitive, ls]	128	151	1
LRR [sensitive, ls]	152	175	0.0012
LRR [sensitive, ls]	152	175	0.038
LRR [sensitive, ls]	176	199	0.00081
LRR [sensitive, ls]	176	199	0.025
LRR [sensitive, ls]	200	222	0.0049
LRR [sensitive, ls]	200	222	0.15

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
CLV2 [A. thaliana]	33	238	7e-18
Xa21 [O. sativa]	33	261	4e-15
FLS2 [A.thaliana]	50	249	3e-15
CLV2 [A. thaliana]	74	248	4e-14
Cf-9 [L. pimpinellifolium]	78	248	2e-13
FLS2 [A.thaliana]	78	248	5e-11
Cf-9 [L. pimpinellifolium]	79	260	1e-12
CLV2 [A. thaliana]	79	262	3e-11
FLS2 [A.thaliana]	82	249	5e-14
Cf-9 [L. pimpinellifolium]	83	215	1e-11
FLS2 [A.thaliana]	83	695	1e-41
FLS2 [A.thaliana]	84	260	5e-11
FLS2 [A.thaliana]	85	256	4e-11
FLS2 [A.thaliana]	90	260	2e-14
FLS2 [A.thaliana]	90	247	3e-14
Xa21 [O. sativa]	98	244	2e-12
Xa21 [O. sativa]	99	247	6e-14
CLV2 [A. thaliana]	125	248	4e-11
Xa21 [O. sativa]	127	262	8e-11
Rpg1 [Hordeum vulgare]	400	694	4e-22
Pto [L. esculentum]	404	687	2e-40
Rpg1 [Hordeum vulgare]	404	690	9e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	294	316	out -> in

Report for 2945.m00115

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)