Report for 2961.m00060

 > 2961.m00060, length: 420, copies: 2 

MTKNSLGFYICFYVEEYVAGFLALYLLEIGDRLRLCGSDLLPFYEIEFHGCDAWFRKKQPVEGDDGEHRVKIFSY

SELRKATHDFSGANKIGEGGFGSVFRGVLRDGTTVAVKVLSATSRQGVREFLTELTAISDIKHENLVTLIGCCAE

GSHRILVYNYLENNSLAQTLLGSRGSNIRFDWRTRVKIAVGVARGIAFLHEEIRPPIIHRDIKASNILLDKDLTP

KISDFGLARLLPPNATHVSTRVAGTLGYLAPEYAIRGQVTKKSDIYSFGVLLLEIVSGRCNTNTRLPYEDQFLLE

RTWVRYEQERLAEIIDADLGNDLDVDEACRFLKIGLLCTQDAMARRPNMSTVVRMLTGEKHFSVHRITRPAMITD

FADLKVSSSQQKENETTRSSNMRSFSTTDETEPFSSSETPTQTSI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	85	283	4.2e-52
Ser/Thr pkinase [Pfam ls]	85	358	9e-47

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	65	356	5e-40
Rpg1 [Hordeum vulgare]	68	357	1e-34
Pto [L. esculentum]	73	353	3e-53
Rpg1 [Hordeum vulgare]	73	356	2e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	27	in -> out

Report for 2961.m00060

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)