Report for 2964.m00127

 > 2964.m00127, length: 572, copies: 1 

MPLLRGGLVSVVLLLLASPFFFSANPAATAVGDCPLDFSWANFTLASAACSDPTQRAACCRYINAFVAISMARYA

NATGRLGVPPAFSEICLSSVSETFKLRGIPTDADVFCGLGPKIRVSYQCAGRDTVLEMLQSPNFNDVVGSCRGPL

SLDITCKTCLNYGIVYLHRLIGSDDNVGLSVCRNAVFVTLATQQGIFSYDDIVKCFFGVQGITIFPGPSSVTSTP

ASSPNVTTPVDAPAPKTKTVLQKHHQPYRITVIPGIGIAVILLAVLLQLVLVILIRRKNRELKNADLHAQNPENA

FCQSQSWRCPEGQSPMFQRYSYKETMKATNNFSTVIGKGGFGTVYKAQFSDGSIAAVKRMDKVSRQAEEEFCREM

ELLARLHHRHLVTLKGFCIERKERFLVYEYMANGSLKDHLHSSGRKALSWQSRLQIAMDVANALEYLHFFCNPPL

CHRDIKSSNILLDENFVAKVADFGLAHASRTGAISFEAVNTDIRGTPGYMDPEYVITQELTEKSDIYSYGVLLLE

LVTGRRAIQDSRNLVEWAQGHLSSGKITPEFVDQRSGAWLTWISCIW

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	330	529	2e-50
Ser/Thr pkinase [Pfam ls]	330	565	2.5e-38

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	241	552	5e-35
Rpg1 [Hordeum vulgare]	318	530	6e-30
Pto [L. esculentum]	319	552	1e-52
Rpg1 [Hordeum vulgare]	329	532	6e-24

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out
putative TM domain	258	280	out -> in

Report for 2964.m00127

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)