Report for 2968.m00156

 > 2968.m00156, length: 726, copies: 1 

MTSNITLVFLLMMCLAAAVAAAATPGVAGGNGLLHTIPSKNSLAHCPSTCGDIGFSYPFGIGHGCFRQGFELICD

NTTHPPTLLLANTTTKVIGQSGRTLEVIEIPAIAFNIAMNNSSIIDYIRYWVSPANGFTIVNESTLFVIGCGIEA

CLFDLDTNETMGSCITMCSDNLGIMEMHDGDCTGIGCCHIIVRRELRRFWLKLDHPDDRTTPRSYRVLSRAQVFI

LPTINSYQFNTNDLVSSSWMNTSSIGGTLLRGAIMDQETCPGASASKATYACTTNTNCFNATNGGYYCSCRNDVT

DGNPYVNLGCSDDPGITIGIGCGLGSIILALGAIVLINKWKRGVQKRIRRAHFKKNQGLLLEQLILDEKAQDKTK

IFSLEELEKATNYFDATRVLGSGGHGTVYKGILSNQCIVAIKMSKIAEQTEIDQFINEVAILSQIIHRNVVKLFG

CCLEAEVPLLVYEFISNGTLYDILHSDVSVKCLLSWDDRIRIAVEAAGALAYLHSAAAIPIYHRDVKSSNILLDD

NFTTKVSDFGASRTMSLDQTHVMTNVQGTFGYLDPEYYYTGQLTAKSDVYSFGVILVELLVRKKSIFINDQGTKQ

SLAHYFVEGHQQGVVMEILDSQVMEEANREEIDEIVSIAESCLKTKGEERPTMKEVEMRLQFVRTIRQRKCQQFP

VTEGEIEHFPFPNTSNSSDGRFSHSTGLTCDSVSGSYSLEQQFSSSINLPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	389	595	4.9e-44
Ser/Thr pkinase [Pfam ls]	389	662	1.8e-45

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	323	664	1e-41
Rpg1 [Hordeum vulgare]	373	668	2e-33
Pto [L. esculentum]	377	668	6e-54
Rpg1 [Hordeum vulgare]	377	660	2e-24

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out
putative TM domain	315	337	out -> in

Report for 2968.m00156

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)