Report for 2972.m00167

 > 2972.m00167, length: 309, copies: 1 

MRAMVVVLVLAAAGAAAATTKKKECNAGDKAALLAIKKALGDPYHFASWTPDNLCCEWYDVTCDDTTDRVVGLSV

FQDANLTGTIPDAVAGLTHLRTLTWHHLPQISGPIPPAIAKLNRLSLLIISWTAVSGPVPSFLGGLKSLTLLDLS

FNSLTGAIPPSLAALPFLSGIDISRNRLTGPLPPALFSKLNTTQQGGAYLRLSRNNLTGGIPAEYGGVAFEVMDL

SRNALSFDMTGLRLQEGVSSLDLSHNMLYGGVPAQVAGLSSLQDFNVSYNRLCGELPAGAARFDQYSFFHNKCLC

GPPLPTPCN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	143	166	0.0022
LRR [Pfam ls]	167	191	1.3

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	119	142	0.77
LRR [sensitive, ls]	119	142	21
LRR [sensitive, ls]	143	166	8.2e-05
LRR [sensitive, ls]	143	166	0.0022
LRR [sensitive, ls]	167	191	0.048
LRR [sensitive, ls]	167	191	1.3
LRR [sensitive, ls]	242	265	0.27
LRR [sensitive, ls]	242	265	7.3
LRR [sensitive, ls]	266	290	1.7
LRR [sensitive, ls]	266	290	47

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
CLV2 [A. thaliana]	18	275	8e-14
Xa21 [O. sativa]	27	287	3e-25
FLS2 [A.thaliana]	56	283	3e-21
FLS2 [A.thaliana]	70	289	1e-17
FLS2 [A.thaliana]	71	282	1e-16
FLS2 [A.thaliana]	77	308	3e-15
Cf-9 [L. pimpinellifolium]	80	282	8e-11
CLV2 [A. thaliana]	80	281	6e-17
FLS2 [A.thaliana]	80	282	1e-21
Xa21 [O. sativa]	80	307	8e-18
Cf-9 [L. pimpinellifolium]	81	308	2e-12
CLV2 [A. thaliana]	81	282	1e-14
CLV2 [A. thaliana]	82	303	7e-15
Xa21 [O. sativa]	83	301	7e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2972.m00167

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)