Report for 2973.m00130

 > 2973.m00130, length: 945, copies: 1 

MEPRVLMALALVVVAAGVPAVLCQTNAQDAAALEGLKSQWTNYPLSWNSGDPCGGGWDGIMCTNGRVTTLRLSSV

SLQGTLSSSIGQLGQLTYLDLSFNINLGGPLPAEIGNLGELTTLILAGCSFTGNIPIAIGNLRKLGFLALNSNKF

SGGIPSSIGVLTNLLWLDLADNQLTGSVPISTSTSPGLDQLVKTQHFHFNKNQLTGTLTGLFNSNMTLIHILFDS

NKFSGSIPAEVGTVSTLEVLRLDRNGFTGAIPATIGSLVKLNELNLANNKLTGSVPDLSNMTNLNVVDLSNNTFD

PSVAPSWFTSLTSLASVVLSNNQFNGTLEITGNISSSLQTVNLMDNRIVSTDTASYKKTLLLAGNPFCAEQDPNN

RAFCSRQLQNASPYSTSMEKCGSAQCSDGQNVNPASCGCAFSYNGKMVFRAPFFVDLVSSTPFQLLESTMAAKLN

LLPGSVALSDIHFNSDNYLQVQVKLFPTSGVTFNLSELTRIGSSLSNQIYKPPANFGPYFFIADPYAPLAVALGG

KKSKMSTGAIAGIAVAGGVLVIALIFMSLFALRQKRRAKELKERADPFASWAAGQKDSGGAPQLKGARFFSFDEL

KICTNNFSDNHEIGSGGYGKVYRGILGDGTRVAIKRADRNSMQGAVEFKNEIELLSRVHHRNLVSLIGFCYEQGE

QMLVYEYISNGTLRENLTGSGMYLDWKKRLRIALGSARGLAYLHELADPPIIHRDIKSTNILLDNNLKAKVADFG

LSKLVADTEKGHVSTQVKGTLGYLDPEYYMTQQLSEKSDVYSFGVVMLELVSGRQPIEKGRYVVREVRLAIDPAD

HDHHYGLRGIVDPAIRDAARTPVFRRFVQLAMRCVDESAAARPAMGAVVKEIEAMLQNEPDDAGAGEGDSSADPS

ANEFDRHRGGGGPPAHPYSDVEISRGSYAGDGASDYMPYFEVKPK

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	90	114	1.2
LRR [Pfam ls]	115	138	1.4
LRR [Pfam ls]	163	186	5.4
LRR [Pfam ls]	241	264	2.1
LRR [Pfam ls]	265	287	0.0085
LRR [Pfam ls]	288	312	0.27
Ser/Thr pkinase [Pfam fs]	607	806	3.6e-52
Ser/Thr pkinase [Pfam ls]	607	883	1.2e-44

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	66	89	1.9
LRR [sensitive, ls]	66	89	51
LRR [sensitive, ls]	90	114	0.043
LRR [sensitive, ls]	90	114	1.2
LRR [sensitive, ls]	115	138	0.053
LRR [sensitive, ls]	115	138	1.4
LRR [sensitive, ls]	139	162	0.28
LRR [sensitive, ls]	139	162	7.5
LRR [sensitive, ls]	163	186	0.2
LRR [sensitive, ls]	163	186	5.4
LRR [sensitive, ls]	217	240	2.8
LRR [sensitive, ls]	217	240	75
LRR [sensitive, ls]	241	264	0.077
LRR [sensitive, ls]	241	264	2.1
LRR [sensitive, ls]	265	287	0.00031
LRR [sensitive, ls]	265	287	0.0085
LRR [sensitive, ls]	288	312	0.01
LRR [sensitive, ls]	288	312	0.27
LRR [sensitive, ls]	313	335	2.4
LRR [sensitive, ls]	313	335	66

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	4	355	7e-29
Cf-9 [L. pimpinellifolium]	42	360	3e-22
Xa21 [O. sativa]	46	348	1e-35
Xa21 [O. sativa]	58	303	3e-28
FLS2 [A.thaliana]	61	351	2e-31
Cf-9 [L. pimpinellifolium]	64	345	3e-21
Cf-9 [L. pimpinellifolium]	64	317	3e-20
Cf-9 [L. pimpinellifolium]	64	281	2e-12
FLS2 [A.thaliana]	66	367	1e-34
CLV2 [A. thaliana]	67	325	3e-23
FLS2 [A.thaliana]	67	877	6e-62
Xa21 [O. sativa]	67	690	4e-35
CLV2 [A. thaliana]	69	348	3e-23
Cf-9 [L. pimpinellifolium]	70	348	3e-12
CLV2 [A. thaliana]	70	376	3e-13
Cf-9 [L. pimpinellifolium]	90	346	3e-19
CLV2 [A. thaliana]	114	344	2e-16
Rpg1 [Hordeum vulgare]	593	877	2e-40
Pto [L. esculentum]	595	882	4e-65
Rpg1 [Hordeum vulgare]	595	878	2e-30

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	535	557	out -> in

Report for 2973.m00130

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)