Report for 2997.m00154

 > 2997.m00154, length: 601, copies: 1 

MANKSKSAAASPSSSSSPSVALGLAATTPTTSPLPLAPAAAASSSNPNATPADTTPTSPPPASPPLPSATPPLAA

SPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAPVPAAAPPPTAPSPYSAPSPTPTPTHTQPRPSPP

LLPTPATAADPANPNKARHPSSNKSSSPAAPRRTNSSSSPPNLAIAVGAVLAILVLSLLGAAIWYTTKKKKKQRR

RDNGYRAGFMSPTSPLSSHHPSSGSGASANVGSSLDPSFKTNYSAGSPKLKACMSDISMGNSRFFTYQELYQITD

AFSAHNLLGEGGFGSVYKGHLPDGKQVAVKQLKDGGGQGEREFQAEVEIISRVHHRHLVSLVGYCISNNQRLLVY

DFVPNNTLHYHLHGHPRIIHRDIKSSNILLDNNFEAHVADFGLARLALDAVTHVTTRVMGTFGYMAPEYASSGKL

TERSDVFSFGVVLLELITGRKPVDASRPLGDESLVEWARPLLTQAIETGNLEELVDPRLERNFNEAEMFRMIEAA

AACVRYSASRRPRMSQVVRALDSLADIDLTNGVQPGQSELFNVANTAEVRMFQRMVLGNHDDSSDMSQYGWSSSR

Q

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	302	390	6.3e-18
Ser/Thr pkinase [Pfam ls]	302	543	1.1e-32
Ser/Thr pkinase [Pfam fs]	392	472	3.8e-21

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	274	547	3e-48
Rpg1 [Hordeum vulgare]	278	549	1e-28
Xa21 [O. sativa]	283	388	9e-14
FLS2 [A.thaliana]	290	549	6e-30
Rpg1 [Hordeum vulgare]	290	556	1e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	193	215	in -> out

Report for 2997.m00154

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)