Report for 3010.m00115

 > 3010.m00115, length: 230, copies: 1 

MAGDRAALLALRDALRLPGKSLRGAVPVGTVGNLTALRTLSLRTNAISGGVPADIGGCVQLRSLNLSGNRLAGRL

PEGLFSLALLEKVDLSGNRLNGGVSPEFSRLASLTTLNLDRNGFNGTLPGNLMLPKLAQFNVSYNGQLGGAVPAS

LTGMPASAFLGTALCGGPLAPCANPSPPSPGGSKGVREEEEDRRERCHEKCNCRMRPEETQSCRAKFQNRLAAFN

RHHMN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	60	83	0.045
LRR [Pfam ls]	84	107	1.5
LRR [Pfam ls]	108	128	7.1

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	36	59	0.34
LRR [sensitive, ls]	36	59	8
LRR [sensitive, ls]	60	83	0.0019
LRR [sensitive, ls]	60	83	0.045
LRR [sensitive, ls]	84	107	0.064
LRR [sensitive, ls]	84	107	1.5
LRR [sensitive, ls]	108	128	0.3
LRR [sensitive, ls]	108	128	7.1
LRR [sensitive, ls]	131	155	1.6
LRR [sensitive, ls]	131	155	37

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	6	172	2e-11
Xa21 [O. sativa]	10	148	3e-12
CLV2 [A. thaliana]	14	140	2e-13
FLS2 [A.thaliana]	14	151	6e-14
FLS2 [A.thaliana]	15	154	2e-16
Xa21 [O. sativa]	15	156	3e-15
Xa21 [O. sativa]	15	152	2e-14
Xa21 [O. sativa]	15	148	1e-13
FLS2 [A.thaliana]	20	151	1e-11
Xa21 [O. sativa]	21	151	4e-14
Cf-9 [L. pimpinellifolium]	40	167	6e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3010.m00115

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)