Report for 3015.m00173

 > 3015.m00173, length: 461, copies: 1 

MESKTAKIVAGAAAAVLLVLELALYLRFRLSRPFFLSTAVIVSAALSAAAAALLHHAAGERRRAARMARRLPSME

DERIRVEYSYFRKVAGLPRKLTLESLAAATDGFQYAVGRGSSGTVYKGILDDGTAVAVKRIDGGADHADKEFKSE

VSAIASAQHAHLVRLVGFCLVPRGPRFLVYEYMEHGSLDRWIFSPHSGDRRRRRYLPWAARYQVAVDVARALAYL

HHDCRSKVLHLDVKPENILLDDGFRGVLSDFGLSKLVGKEQSRVVTTVRGTTGYLAPEWLLGVGITEKSDVYSYG

LVLLEMVGGRRNLMQAENGDDGSSASPRWTYFPKIAGDMAREGRVMEVLDRRVVESGEAVEEAAVRRLVHVALWC

AQEKAGARPTMARVVEMLEGRGAAAEAVEAPPPSDMIVVDLLALDPAARGPGPFGLPPPAAASDGGMQVTSSGIS

NSFALSYLSGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	112	307	5.1e-46
Ser/Thr pkinase [Pfam ls]	112	354	2.6e-38

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	94	397	1e-30
Pto [L. esculentum]	95	394	4e-38
Rpg1 [Hordeum vulgare]	95	394	9e-25
FLS2 [A.thaliana]	99	399	2e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	10	28	out -> in
putative TM domain	10	28	out -> in
putative TM domain	35	57	in -> out
putative TM domain	35	57	in -> out

Report for 3015.m00173

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)