Report for 3019.m00183

 > 3019.m00183, length: 1007, copies: 1 

MAETALSMARSMLGGAISAASAAAGEEMSLLMGVQKEIWFMNDELKTMQAFLIAAETMKKKDLLLKVWAEQVRSL

SYDIEDCLEEFMVHVGNQSLLQQLTNLKDRHRIAVKIRNLKSRLEEVSSRNTRYNSIKMEANNTFDEIESMEDVR

NHSRSNIDEAKLVGFDTPKKELLDKINMDANDDDHCRVLCVVGMGGLGKTTLVRKIFESKEDIINNFPHRAWIVV

SQSFSMIEMLKDMISQLLGHESLKRFEGKPIRAHDLGTHLRDGLKELRYFVVFDDLWNTDHWEWIREFALPSKNN

KRSRVIVTTRLDGVANACTTEPFVYRLKLLETECAIDLLLRKMGESKEDMKNDNNLKSIVTQLVKKCGCLPLAIV

TIGAMFANKPSSKWEEMCRQLPSELENNPSPGVEAIRRVVTLSYGHLPSHLKPCYLYLSIFPEDIEIKRRHLVNR

WVAEGLVRARVGMTISDVGESYFDELISRSMIQPSRVNMEGHVKSCRVHDIMRDIIVSISKEENFVYSTGDNVST

VIVEKFRHLSCHGGNYPIVGMDFSRVRSLTVFGEFDQRPMLVGSSICSAQFTMLRVLDLENAVFSVTQKDINKIG

LLRHLRYLNTHTRRRSTIYALPSSIGKLQNLQVLDIRESEISTLPTDISKLLMLRILRCSKGPWYFYFYFDPDEP

IKCLKHTLRMPLMLTPLVGSAARNYTIAELHRAYSSHWSETPGVRVPTGISKLKELQVLEVVDLKLTKSKAIEEL

GELRWLQKLRVSTKGAQDKKRKTLCEAIEKLSSLQSLCVYEGYYFITGTLEWLGPCNFSPPPLLRKLELHGRIRV

MPDSFRNLKQLRKIFLRLSELDGRAIEILGTLPNLMLLNLDGRAYVGNELAFKKHEFPNLKELRISMLSELRGIR

FEKDALPHMERMEIECCQLRSGIVGIKHLEQLNEISLGCDVAGLDLLEQEVKAHPKTPALRLLQDRSKIDLGLPV

VLTKDEGSNVEEEAKESVHDDAGESSQVISSP

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	148	462	6.1e-63
NB-ARC [Pfam ls]	148	462	2.7e-63
LRR [Pfam ls]	630	652	0.23

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	578	606	4.3
LRR [sensitive, ls]	578	606	100
LRR [sensitive, ls]	630	652	0.0098
LRR [sensitive, ls]	630	652	0.23
LRR [sensitive, ls]	730	754	3.6
LRR [sensitive, ls]	730	754	84
LRR [sensitive, ls]	908	930	3.7
LRR [sensitive, ls]	908	930	86

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	8	937	1e-72
Mla1 [Hordeum vulgare].	15	663	1e-76
Pi-ta [Oryza sativa]	29	635	3e-58
I2 [L. esculentum]	45	917	2e-46
Pib [Oryza sativa].	48	349	3e-29
Pib [Oryza sativa].	158	937	4e-92
RPS2 [A. thaliana]	162	656	7e-23
Xa1 [Oryza sativa]	180	657	6e-28

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3019.m00183

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)