Report for 3019.m00194

 > 3019.m00194, length: 845, copies: 1 

MRRRGRMIPPALLLAAAVAAALATAVSGQGRPVTESGAQTAPTPSTFTPKDNFLIDCGSTSPVTTGGKVYKTDAQ

SNSLLSAKDAIKVATTDADVPSPLYLTARIFRDEAVYSFPLTVPGWHFVRLYLFPLKNSDFDLTTATFTVSTDTN

VLLHSFTAENKPVMKEFLVNATENHLAVKFYPLKGSAAFINAIEVVNAPDELITDMAMGIAPVGEMTGLAEAAYQ

VVYRINVGGPAIAPDKDTLGRQWDVDAPYVQSKEAVKDVSVPVGNIKFPDGTSKLVAPAQVYASCAKMADAGVGS

PSFNMSWKMEVDPAFGYLVRLFFADIVSKSMNDLYFNVFVNGRKAISGLDLSTVTGELSAAYYKDIVVNSSIATD

KLSIQVGPMGEDTGRVDALLSGVEVLKMSNSVGSLDGEFGVDGKKADDGSGSRKAVAAVGFAMMFGAFAGLGAMA

VKWYKRPQDWERRNSFSSWLLPIHTGQSFTTSKGGSSKSGYTFSSTLGLGRFFSFAEIQAATKNFEESAIIGVGG

FGNVYIGEIDDGTKVAVKRGNPQSEQGINEFNTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMHNGPFRDHI

YGKDLPALTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDDNFVAKVSDFGLSKDGPGMNQLHVSTA

VKGSFGYLDPEYFRCQQLTDKSDVYSFGVVLLETLCARPPIDPQLPREQVSLAEWGMQWKRKGLIEKIMDPKLAG

TVNQESLNKFAEAAEKCLAEFGSDRISMGDVLWNLEYALQLQDANPPEGADKPADHDGAGAAPATSSGSGVSTVP

DVSTTAAGEMFAQLADMKGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	515	717	3e-46
Ser/Thr pkinase [Pfam ls]	515	784	1.3e-41

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	483	785	2e-36
Rpg1 [Hordeum vulgare]	501	724	9e-28
Pto [L. esculentum]	503	794	6e-97
Rpg1 [Hordeum vulgare]	503	786	5e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	29	in -> out
putative TM domain	7	29	in -> out

Report for 3019.m00194

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)