Report for 3044.m00253

 > 3044.m00253, length: 1686, copies: 1 

MAMMLVRVSTRVMNTVLSKLSKMLEDKYTKLKGVHSQIAFFRDELSSMKAALEMLESVEELDPLHKDWRDTVREL

AYDIEDFIDSFLVLVDHKQDEQSTFFKGFSYKLKKMKACHEISNEIEELKTRVIEASKRHKRYNFIGLVASCTTS

DIDPRLPALYVEVDELVGINGPKEHIMEWFAKGIRDVKVKVLSIVGSGGLGITDYTSEDERQLIDRIRDRLKDKR

YFVVIDDVWDVEAWKVVSLALFNNRCGSRIVMTTRNAAVASHCSSDGGCVYQMEPLNFADSKMLFCQKAFRSREL

YNPHLEKVCDEILAKCGGLPLAIITVSSLLAGKHAKDEWDRMLNDIGCALANNPDAGNMTKILSLSYFELPHHLR

TCFLYLCIFPEDYKVNKQRLINRWIAEGFVHEKQGWSTYEVGQNYFNDLINRSLIQPVDLKYGQAKACRVHDIIL

DFITCKATKENFVTTLDFAEHGHISKFRVRRLCAKNHNEEKVNKSASLNLSHVRSLTIFQHVNGTSLFVFPTLRV

LDLSKSGLTENHLESIDKLHHLKYLSLRSTSITKLPTKIEQLHYLQTLDICDTKIQELPLSIAKLECLAHLYVER

WTRFPDGLIGKMQSLEELEEFGIYCELGKSLEGFSQLTKLRTLKVHLFWWSDAEECQNYVSALLSSNLHHLYLTG

GPLTLESWYPPTPCIIRKLHIKGCYNRKVPNWMSYLGSLTELQLWIRRMGPNDVKILGAIPSLHFLEVRTLCGTN

GRIIICGNQGFRSLRYFSLRIKRCGTMLEFEAGSMPKLEHLQLEFRLHGMDCLNGASDFGIQNLSTLTKVEIGIW

GNIYSDGIYDPAQDMDDSITRSVVSLIKATIETLPNCPTSRFQLEYDCGNCLLGETSQEFEGQGPDEAYPHEHKI

FSLQELQDATDFFSNNNVLVDLFDSKLYKGRLQDGSLVVVHMDCPTADWSRRTRQFQTQVEMPVHRNLYEDIEHL

LSGCYSTERPPSQAPLDWQTRLRIALGSARGLSYLHDHCDPKIIHRDIRAVNIFLNEDFEALVGNFCLAKLEDDM

DTDDRTAVRGVVGHIAPEYLSAGILSEKTDVYGYGIMLLELITGKRALYHDGRARDEDIFLLDWVKRLLKEKKLK

MLVDPDLRNNYIHVEVKSLIKVALICTQVSPVKRPKMVEVVRMLEGGDGLAQRWEVWWKIEVVRQEVPLTSSFSL

SAPNSFANNTSLCGLGTPSAPPLHPPPPYNPGDSFRFTAMQQPLFPPVRCGTYAGRSSRTGAISGGVAAGAALLF

NIPAIGFAWWRRRKPQEYFPVVPGVHLGQLKRFSLRELQVATKTFNNKNILGTGGFSKVYKGRLADGSLVAVKRL

KEQRTPGGELQFQTEVEMISMALHRNLLRLRGFCMTPTERLLVYPYMANGSVASRLRERPPSEPPLDWQTRRRIA

AGSARGLSYLHDHCNPKIIHRDVKAANILLDEDFEAVFGDFGLAKPMDYKDTHVTTAVHGTIGHIAPEYLSTGIL

SEKTDVFGYGIMLLELITGKRAFDLALLARGEGVMPLDWVKRLIKEEKLEKLIDPDLQNKYIDAEVESLIQVALL

CTQGSPLERPKMAAVVRMLDEGDGLAERWKEWQKIEIVQQDVELGLYQNGWTVDSTENLHAVELSGPRWIGQFGP

VMAVFFLGRLYVYLRLTLLGTLSTLGGRTGIDIVQR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	151	410	4.5e-37
NB-ARC [Pfam fs]	209	410	7.3e-51
LRR [Pfam ls]	522	545	1.4
LRR [Pfam ls]	546	568	1.9
LRR [Pfam ls]	569	591	5.3
Ser/Thr pkinase [Pfam fs]	990	1094	5e-12
Ser/Thr pkinase [Pfam fs]	1320	1524	1.5e-48
Ser/Thr pkinase [Pfam ls]	1320	1594	1.1e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	522	545	0.052
LRR [sensitive, ls]	522	545	1.4
LRR [sensitive, ls]	546	568	0.073
LRR [sensitive, ls]	546	568	1.9
LRR [sensitive, ls]	569	591	0.2
LRR [sensitive, ls]	569	591	5.3
LRR [sensitive, ls]	667	695	3.7
LRR [sensitive, ls]	667	695	99

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	1	596	2e-67
Mla1 [Hordeum vulgare].	8	787	1e-114
RPM1 [A. thaliana]	17	822	4e-64
I2 [L. esculentum]	45	831	2e-39
Xa1 [Oryza sativa]	115	643	9e-26
RPS2 [A. thaliana]	199	701	2e-29
Pib [Oryza sativa].	207	604	2e-59
FLS2 [A.thaliana]	886	1169	2e-19
Pto [L. esculentum]	891	1170	4e-26
Rpg1 [Hordeum vulgare]	895	1170	6e-14
Rpg1 [Hordeum vulgare]	973	1169	4e-17
Rpg1 [Hordeum vulgare]	1302	1594	1e-34
FLS2 [A.thaliana]	1304	1606	5e-36
Pto [L. esculentum]	1307	1595	4e-46
Rpg1 [Hordeum vulgare]	1308	1598	6e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3044.m00253

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)