Report for 3044.m00257

 > 3044.m00257, length: 802, copies: 2 

MGPYCVSRFIAQLIVEGVLPPYLVVIDDVWATEAWETIKLALLSNNCDSRIITTTRNTAVASKCSYHGGYVYHME

PLSFVDSKRLFFKRAFGSENLYYPHLEEVSNGIIKKCGGLPLAVITISSLLADQYAKDEWVRVLAAIGSALAKDP

NAGNMRRILSFSYYDLPYHVRTCLLYLSLFPEDHKINKQRLINRWIAEGLIHEEEGSAYKTGEHYFHELINRSLI

QPVDVQYGKPVACRVHDIILDFITCKAAEENFTTLLDTTEFKPIPIDEPRRVYFQNNRKENVIMATNLSLKNVRS

LTIFGYFVKTPSLLDFKVLRVLDLKDCRKLQNHHLTGIEMLLHLKYLSLGSRYITELPKKLGELRYLETLDIRET

MIKSLPSAITTFQRLVRLLINHDTTFPDGIGRMQSLEELQTFDIFTYSSRNSLQEFGQLTKLRKLRVTWNLDNSL

EDHRTTIEGSMKHLLSLCDLHYLLIWNDCPGLSLDSWCPVTLSSLREFQIEYGSIANVPKWMNMLACLTELDLTL

CSTKQEDIDILGEIPALLVLRLTTSHGTNGRIFISSYNAFRCLKYFFLHINMCGTLLEFEEGSMPKLQHLMIKFN

AHRWKCLNGASDLGIRHLSNLTMAEVIIGTDYSHGCYNPEEELMKSSTNFAASLIQSAVETLPNRPVLRFQLQRE

ACIQFEERSVNYEIEVNLGEVRDVGKVDQGETRVGSTKEPLYTIFEVIRRFNFSQSQTAFKFDQVCRINMTEKEM

IQPFCVLDPILCGGRDGRGRALRARVVKTALSNYPKEINIGLGGSRKCIRGG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	2	206	9.8e-12
NB-ARC [Pfam fs]	22	206	3.1e-47

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	343	365	0.28
LRR [sensitive, ls]	343	365	7.6
LRR [sensitive, ls]	366	388	0.35
LRR [sensitive, ls]	366	388	9.3

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	22	598	4e-31
RPM1 [A. thaliana]	22	598	5e-45
RPS2 [A. thaliana]	22	547	2e-27
Mla1 [Hordeum vulgare].	22	673	1e-88
Pi-ta [Oryza sativa]	22	468	1e-58
Xa1 [Oryza sativa]	22	623	1e-24
Pib [Oryza sativa].	23	390	2e-51

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3044.m00257

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)