Report for 3053.m00166

 > 3053.m00166, length: 617, copies: 1 

MVRVVVGSRRVHVQLLILQLLAAMVAAAEEPAVPTAKKIKSCTTSCGNISIEYPFGVEPGCYHTVGFNLTCDHSY

HPPRLFLGDGTVQVLDISIPNGTVRINSGRINLEYDGRGSANGTWGGGLPDGGPFFLSESGSSLVLMGHDSQVDV

WGLGGDNPIASCSVICPRIPSAIFGISACSGICCCQTNIILGYSSYLIQIHGDANFLNIYMVDQGFNYTNFINSN

VDLIIFDSDRDPQALPALLEWVISNSTSYCPRNSSAPECRSAHSSCQDTDAWANNGYRCKYSYGYQGNPYIIDGC

KGLSIALIVSGGSIVLILVLATPLVARVVKQRREKKLKEKFFKQNHGLLLQQLISRNTDFGERMIITLEELQKAT

NNFDRSCQVGDGGHGVVFKGILDLNVVAIKKSKIIVQREIASSMPIYHRDIKSSNILLDDSLTAKVSDFGASKYT

PIDRSEITTTVQGTIGYLDPMYYYIGRLTDKSDVFSFGVLLVELLTRKKPVVDTFDGDGLVSHFILLLSEGNLIN

IIDPQVKEEEDGEVHEVAALCTKLKGGERPSMREVEMALENILSKKGPFHKGNRESSRPSKNQISALYMSIEGVA

TEASSQSMEEEMLSFPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	314	560	4.2e-07
Ser/Thr pkinase [Pfam fs]	421	467	2.3e-11
Ser/Thr pkinase [Pfam fs]	481	500	0.0061

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	420	580	2e-17
Rpg1 [Hordeum vulgare]	420	499	2e-12
Pto [L. esculentum]	421	568	3e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	304	326	out -> in

Report for 3053.m00166

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)