Report for 3053.m00172

 > 3053.m00172, length: 772, copies: 1 

MNCVLSPNHQATLIRAPIHVSKMHVFAIATLHLLQFLAAIPLILSYNIALPGCTDTCGNTTIPYPFGIGDERCFR

EGFKLVCDPAYDPPKLFMNGPGYEVHKIKLARRVLHLDTGITQMLGGDSYNQKWILDLDDKLFRVSADMNVFITL

GCGFHFFIGSSPAAAGDNATSSSNCVSNCRPGYPILATDGTCYGIGCCNASVVEDHNSYTIKLLSLQSSPRAVPF

NASMVVVKGEWWRRADNAMLLQQEVLSRLGAIAGAPDAARNVGVRTVVNWMLGNSSCVEAKKLSDFGCLSDNRRG

YACKCRSGYDGNPYMPNGCQDINECMLPNPPLCFGKCINTVGSYECICPGGTSGNAHIQNGCVSSKLKFSGLIIG

IGLGGSLIIVVLILTGIVVRRKFKSRRAKKLKEFFFKQNRGLLLHQLVDKDIAERMIFSLEELEKATNNFDESRK

LGGGGHGTVYKGILSDQRVVAIKKSRYAIKREIDGFINEVAILSQVNHRNVVKLFGCCLETEVPLLVYEFIPNGT

LHEYLHVNSAQSVPWKERLRIALEIARSLAYLHSAASVSIIHRDIKTTNILLDDRFIAKVSDFGASRGIPIDQNI

VTTTIQGTFGYLDPEYYRKSRLTEKSDVYSFGVILAELITRRRPTSYISPEGFNLTEQFILLVSEDRLLEIVDSQ

ITKEQGEEEAREVAEIAVMCLNLKGEDRPTMRQVEVKLEGLQGAVNTIRGRRAVQLNSPLTEESDSNIVAVGDAG

YHNSSRRLSMEEEFWSSMSFPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	445	646	2.3e-52
Ser/Thr pkinase [Pfam ls]	445	715	1.1e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	372	727	1e-41
Rpg1 [Hordeum vulgare]	426	716	5e-31
Rpg1 [Hordeum vulgare]	430	714	2e-24
Pto [L. esculentum]	433	714	1e-57

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	28	50	out -> in
putative TM domain	372	394	in -> out

Report for 3053.m00172

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)