Report for 3060.m00131

 > 3060.m00131, length: 927, copies: 2 

MDIFRVVESILTKMCSVIDQDWELGGKLKNDLICIKEEMGMMNASIEQWEGNIQGPVQQQWVHQLQDLAYDIEDF

IDGHRIGPQEPNHFMPRAARMIFGTDRRPQQVLDVKILKERVAILQKWQQTFGSTQAVGGAGNGSPPSGGFGGCE

ADEQLVGIDNAKRELLSLLSAAESQPDQQNKLKVISILGSNGIGKTTLARRVYDEGDIVEQFHRRAWVASWACED

SASLLKEIVRQLTSEEDGAQGSTSSTEQAGGAGAPNVRNLRQDVAAHLQSHRYLIVIDDLKKVKVWSDIASAFPE

NNKGSRVIVTTSILSIATTCAYGSWVYKMQCLQKDDSENLFWNEVFKGANRIRTPDLDRGSVTIIDKCDGLPLAL

VSAAKYLNCKRHALSGSECKKVGLNLGNHLASEGSFFKEIKRVLAECYDSLPDHGHRMCLLSISMFPRGHRIRRK

SLLRRWLAEGLVVSQIQLNEEDAEDRFKEFIDRNIIEAVDIGNELEAKHWRVHGVMLEFISHKSISDNFITFIGN

DRSTMSSNGQLLKTQQLQRKWKFLVRSLTIRNSSVPNLKEYKSLRVLDLEECNGIDQRVVKNHICELLFLKYLSL

RGTGVRLIPSKIKRLRYLETLDLRETEVEMLPLEVLKLPRLAHLFGSKLEMPQELSNDADLDLQRFFQHESELQV

LAGFVMEDNKAFVHVIRHMSKLKKVKIWRKANAAPAKDLTEHLVVCIQRRLQGSRPLESLSIDFGDLSIDFLGDL

APPCALESLKLRGAMSSLPAFFTSPENQLRELHLWSTGLSGEALSALQNLPYLVYLTLKEDRRGFWSDTFAVQSG

GFPSLRRLRFQAAMLPKVVFEQGSMPDLADLHLLCPEICSSIFFYRSFDMPRNLRLGVWHIENLVSLNDVVLHHS

ASEQQLTAWKDAASAHKNRPNVRRQPQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	139	467	1.3e-28
NB-ARC [Pfam fs]	151	218	8.4e-06
NB-ARC [Pfam fs]	264	467	8e-26

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	568	593	3.5
LRR [sensitive, ls]	568	593	93
LRR [sensitive, ls]	594	616	0.48
LRR [sensitive, ls]	594	616	13
LRR [sensitive, ls]	617	640	0.46
LRR [sensitive, ls]	617	640	12
LRR [sensitive, ls]	778	801	0.27
LRR [sensitive, ls]	778	801	7.1

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	851	1e-55
RPM1 [A. thaliana]	13	903	2e-51
Pib [Oryza sativa].	41	321	5e-16
Pi-ta [Oryza sativa]	61	644	3e-45
Pib [Oryza sativa].	148	648	5e-36
RPS2 [A. thaliana]	153	672	1e-16
I2 [L. esculentum]	164	809	3e-32
Xa1 [Oryza sativa]	177	741	5e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3060.m00131

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)