Report for 3060.m00133

 > 3060.m00133, length: 630, copies: 1 

MMNSLIRKLATVSSEDIDVRPLERKIIRINSDRLLKVIHHVGDAQAMEWMRQILEVAYDVEDWIDLCIHLHGRVR

ADQLERIEEFIVRIDNVEERLSSQSPIGDNPHMLYAMEEDLIHHCERKVRLRRDLVLNLMDKLVVDSDQQLKVLF

ILGDRGIACQINHTELYIKSGGDEHQVIDNFRNFLRNKSSNNEILPKIWVCGVGPWVVLDCWWSAGVGGGGVRGG

YMYFIVIDDIWTTTAWKAIKCAFADNKNGSRIITTAQIDKVSRLSYRHHTDLVVMLGGLRCTPLAIRIAAGLSLS

AYPPPYSYTSAFKQYPLLQGIKRMLHISYAYLSLPLKSCLLYLSLFPENCTISKGRLIRRWAAEGFIDERDEGSI

WETGESYFNELTIRQLIMREFIEDKTSNNIDLEDGSGFAVGCKVHGLVHDFIVSLSSRENMVTSDAELGSMQRGV

IRRLTIKNDFSSIPKDSTQPSGSGTMDVQSINRALASAQKGKIRSLAFLGNSRLLSDVVGFKLLRVLDLEDCKSL

GNEHVQKIRSLFLLRYLGLRGTGVTELQEDIGELHELQTIDVRRTRVKQLPVSVNELKKLVFLLGDGLQAQAGMT

AMQNLEEVSTIDVSERSSLDMVSELLVKSN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	113	372	6.9e-07
NB-ARC [Pfam fs]	318	372	1.2e-13

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	43	572	6e-28
I2 [L. esculentum]	225	590	4e-11
RPM1 [A. thaliana]	228	589	1e-22
Mla1 [Hordeum vulgare].	228	611	2e-32
Pib [Oryza sativa].	230	588	6e-29
Xa1 [Oryza sativa]	320	625	6e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3060.m00133

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)