Report for 3063.m00222

 > 3063.m00222, length: 717, copies: 2 

MAGAPCLLRVLAVSSCLCLLADAARLLAAAPAEEADALLKLKAGIVDGGGALDTWAAGTSPCDGGTSAWAGVVCS

KGSVLGLQLEKEGLSGELDLAPLKSLTGLRTLSFMDNEFAGAMPDVKGLGGLRAIFLSGNKFSGEIPADAFAGMG

WLKKVSLSRNGFTGAIPASLAAVPRLLDLQLNDNKFTGKIPDFPQKDLKVFDVSNNELDGEIPASLKSIDPQMFE

GNKKLCGAPVDAKCEAPSPAATTSPPAATSGKIGTSPSPTAAAETTTTGTVPAEEGTQGATKPTKGSTSFGVLAA

FLGTLAIIGFAVVELQRRREYNTQNFGPAASTKPTLPSAPASPATKPTHAAAAATAAAATTGGGGARSSSVSGST

ARGGGGKAGEQGRLTFVRDDDRGRFFELQDLLKASAEVLGAANLGVCYRATLTGGHSVVVKRFKEMNRVGKEDFE

EHMRRLGRLSHPNLLPLISYYYRKEEKLLIHDYVPNKSLAHLLHGEGRRVKKLVHWPARLKLVKGVARALQYLYD

ELPMLTVPHGHLKSSNILLNDRFEPLLTDYSLVPVMNQSHSAQLMVAFKSPERRQFGRSSKKSDVWCLGILILEI

LTGRPPSYDPPPQPEAATANGDLVGAVASTPEGEWLEKVVDADMIRKWEDEESKGEMVKLIKIGMACCEAAVDSR

WELKTAVESIEELKGGKEEDANDEHSFYSSIDGDEFASVAIN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	126	150	0.014
Ser/Thr pkinase [Pfam ls]	412	685	4.3e-12
Ser/Thr pkinase [Pfam fs]	420	547	7.8e-09
Ser/Thr pkinase [Pfam fs]	585	612	2.6e-05

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	103	125	3.4
LRR [sensitive, ls]	103	125	91
LRR [sensitive, ls]	126	150	0.00053
LRR [sensitive, ls]	126	150	0.014
LRR [sensitive, ls]	175	196	1.3
LRR [sensitive, ls]	175	196	34
LRR [sensitive, ls]	197	217	0.34
LRR [sensitive, ls]	197	217	9

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	1	243	2e-17
CLV2 [A. thaliana]	33	234	9e-13
CLV2 [A. thaliana]	82	220	8e-14
FLS2 [A.thaliana]	82	220	9e-11
FLS2 [A.thaliana]	98	233	5e-13
Cf-9 [L. pimpinellifolium]	104	216	1e-11
FLS2 [A.thaliana]	401	699	2e-11
Pto [L. esculentum]	401	688	6e-25
Rpg1 [Hordeum vulgare]	413	688	2e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3063.m00222

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)