Report for 3066.m00111

 > 3066.m00111, length: 1210, copies: 1 

MAESLILPMVRGVAAKAADALVQRVTGACGAVDDDRRKLQRQLLAVQRALADAEAKSETNLAVRRWMKDLNAAAY

EADDVLDDFRYEALRRDGDATAGKVLGYFTPHNPLLFRVTMSKKLSNVLEKMNKLVDKMNELGLSVDRTESPQEL

KPPYLQMHSAALDESSDIVGRDDDKEVVVKLLLDQRYEQRLQVLPVIGIGGSGKTTLAKMVYNDTRVRDHFQLKM

WHCVSENFEAVPLLKSIVELATNRRCQVPDKDTIELLRRQLEGAIGSRRFLLVLDDVWNEDENKWKDELRPLLCS

AAGGHGSVVVVTTRSQQVASIMGTMRSHELACLNDDDSWELFSKKAFSEEVRETAELVTIGRLIVKKCKGLPLAL

NAMGGLMSSKQQLHEWKAIADSARDKDEILSMLKLSYRHLPSEMKQCFAFCSIFPRNHEMDKEVLIQLWMANGFI

QEDGIMDLEQKGEYTFQYLVWRSFLQDVKAKKTLDHLAELQPSTILQKEIMDKALPYESIGCKMHDLMHDLAKDV

ADECVTSEHVLQHDASVRNVRHMNISSTFGMQETMEMLQVTSSLRTWIVPSPLCRDLKDLSLASLRTLVIEKGIF

HYHSVMSNHVITYSKHLRYLDLSMSQIVMLPSSICVMYNLQTLRLNGCSFLKYLPESMGKMRKLLHLYLLGCDSL

VRMPPNFGLLNNLRTLTTFVLDTKAGCGIDELKNLRHIANRLELYNLRKINCRNNGIEANLHQKENLSELLLHWG

RDKIYTPENSAYNEEEVLESLTPHGKLKILELHGYSGLKIPQWMRDPQMLQCLTTLRISNCLGCKDLSTLWLSVS

LEHLQLSRMDNLTTLCKNVGVGAEGYTIPQQVFPKLKSLKLELLFSLEKWAENTAGEAKNLVTFPELEMLQIIRC

SKLASVPDCPVLKELDRFGSYMLAMNELTHLTSLSKLNYVANSLCDCVSMPLGSWPSLVELVLRSSTHIPTTLQV

EANQGQLEYLRSLSLVNCFTAASGSSEMRLGLWKCFAFVEVLHIHMCLSLVCWPTEELTSLIHLRHLYIEHCHRL

EGKGSSSEEKFMSLSHLERLHIQHCYNLLEIPMLPASLQDLRLESCRRLVALPSNLGNLAMLRHLYLMNCYVLKD

LPDGMDGLVSLKILEIQACAEIEEFPQGLLQRLPTLKELSIQGCPGLETRCREGGEYFDLVSSVQRICIPAAAKT

EMEEESRSGI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	154	455	3e-76
NB-ARC [Pfam fs]	166	455	3.5e-76
LRR [Pfam ls]	639	662	2.2
LRR [Pfam ls]	1087	1110	4.7
LRR [Pfam ls]	1135	1159	2

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	616	638	0.87
LRR [sensitive, ls]	616	638	23
LRR [sensitive, ls]	639	662	0.083
LRR [sensitive, ls]	639	662	2.2
LRR [sensitive, ls]	663	686	0.9
LRR [sensitive, ls]	663	686	24
LRR [sensitive, ls]	721	743	1.7
LRR [sensitive, ls]	721	743	46
LRR [sensitive, ls]	825	862	0.39
LRR [sensitive, ls]	825	862	10
LRR [sensitive, ls]	891	913	3.4
LRR [sensitive, ls]	891	913	91
LRR [sensitive, ls]	1038	1065	0.44
LRR [sensitive, ls]	1038	1065	12
LRR [sensitive, ls]	1066	1085	3.4
LRR [sensitive, ls]	1066	1085	91
LRR [sensitive, ls]	1087	1110	0.18
LRR [sensitive, ls]	1087	1110	4.7
LRR [sensitive, ls]	1111	1134	1.2
LRR [sensitive, ls]	1111	1134	32
LRR [sensitive, ls]	1135	1159	0.075
LRR [sensitive, ls]	1135	1159	2

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	25	694	2e-49
I2 [L. esculentum]	37	1174	1e-114
Mla1 [Hordeum vulgare].	66	691	2e-39
Pi-ta [Oryza sativa]	66	710	4e-23
Xa1 [Oryza sativa]	89	1168	9e-79
Pib [Oryza sativa].	159	668	3e-34
N [N. glutinosa]	161	910	2e-21
L6 [L. usitatissimum]	164	461	6e-13
M [L. usitatissimum]	164	461	7e-20
RPP5 [A. thaliana]	167	1151	7e-12
RPS2 [A. thaliana]	168	907	4e-37
Xa1 [Oryza sativa]	639	1177	4e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	34	59
putative coiled-coil	117	137

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3066.m00111

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)