Report for 3094.m00112

 > 3094.m00112, length: 810, copies: 3 

MDTGVEAVLRKILAFHSHQFSQETKITRGSLPQGSTIVPPSHSRSICSFGAQESSEPIRLEVNIYRFSKNLPMQC

RLHFQEGSFSLYEPFNYVSVRLFHKHRLWIYCNPELHRYCGYTATPSYTDTNTSITYVGDEGFIEAGINHNVDLN

NLQQTDLARRYSTIRFFPNGTRNCYTFKSLTPGDSMSRESICGDGLGVGLGIRRRPWCKYLLRAAFGYGNYDRIN

RLPTFDLYLGVNYWTTVRIVNARLDLRPFQEKIYPGSNMTHALVLLSFFRNTVKFGPNRYHFGTDDHQIRFPDDP

RDRIWQKYEDVSEWTDVPDTVNGIVQNSPNDTYNVPSAVMRSVSTPLNDSRMDLSWSSDSSMNVDIATKFFVVLY

FAEVEAIQGNALRQFDIILDNNTLVSAFSPISMMTSVFSGIVQGSGSHGISLVATSISNLPPLISAMEIFVVRPL

NESSTYSEDAHSMMIIQTKFSVKRNWAGDPCSPATFSWDDLNCSYTPHGPPRITGLDLSHNNLSGPIPDFLGQVP

SLIFLDLSSNNFSGSIPTNLLQKSQEGLLTLRTENNPNLCGTDKCDLILNQSKRKTKLVLEVVPPVVLVFVVLLI

LAIFWYCRKKRPADVTGATNPFENRRFKYKELKLIADSFKTIIGRGGFGPVYLGYLENGTPVAVKMRSQTSNQGK

TEFLAEAQHLARVHHRNLVSLIGYCNDKKHLALVYEYMDGGSLADHLRGQEDLHTEPLTWLQRLNIALDSANGLE

YLHRSCSPPLIHRDVKAHNILLTANFKAKISDFGLTRAFSSETNTHSTTEPAGVGSNSKN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	502	525	0.023
LRR [Pfam ls]	526	550	0.079
Ser/Thr pkinase [Pfam ls]	637	810	7.6e-11
Ser/Thr pkinase [Pfam fs]	638	799	1.5e-41

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	502	525	0.00086
LRR [sensitive, ls]	502	525	0.023
LRR [sensitive, ls]	526	550	0.003
LRR [sensitive, ls]	526	550	0.079

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	499	799	2e-35
Xa21 [O. sativa]	506	740	4e-23
Rpg1 [Hordeum vulgare]	609	803	5e-18
Pto [L. esculentum]	610	803	8e-35
Rpg1 [Hordeum vulgare]	622	799	2e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	583	605	out -> in

Report for 3094.m00112

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)