Report for 3099.m00095

 > 3099.m00095, length: 956, copies: 1 

MLPSGLAVAPPPISLHAAASRTGRQRCLIVLDNVWTVSTWNVVRHALQEDCCSRIVVTTEINDVAQAWSFYKSQH

NASHVIKKHILKMEPLNDDFSRDLLVSRVFGDKDKCPEELNEVSYEIARKCGGLPLATIAAASLLLSRPDKPDEW

IYVQKSLIPDLRIQPTSEGMAQLLNNSFNNLPHHLKACMLYLSIYKEDHIINPDDLVKQWVAEDFVSATEGKSLD

EAARNHFYELVHRGILETEHISCSDEVVSCTVHDMVLNFIKRKAMEENFVTAIDHSQSGIRLADKVRRLSLHFGY

SKDAKAPACIRLSQLRSLVFSGFWKCGPSISEFHLLRVLFLHGKHGEFLDLTRIRELFLLTYLQIEGNVCIDLPS

ELQGLKYLRTLHIGAMVTFLRSEVVHLPPLLHFRLPPNLGYFVDAGSVQSIEELTNLQDLQLACPQIATSDHIKH

NMKLLGSIIGILKSLKSLTVVPVCFSEDSNDNENSSIAIFLDFLDKVPPPCSLLQRLELFPRVCVFHRLPSWIIT

IEKLCILKVAVMELLRKDIETLSMLNALTVFSLYVRTTPAEPIIFDKSGFHVLKYFKFKCSTVSSLRFDEGAMPN

LQRLKMEFNGSTVEQYNLENVGFKHLSGVKVSAKICIAGTSEANRMAIASVLNNAIRQNTRISSVIIRFINRVIK

DLPIVPTPHTDHMHENLRLDKSVRSWPTQCDGCKELGAGHRFKCEQCNSKVYYDMCCATAPHTLKHPLFPGSVFR

FLRKPLASECGRACDACGDLMHGFVYHCFERGLDLHPRCARLPVRTANVKGYVMELRRVSACSRCCICMCGKEGY

RNKFWSYRSSQEGQDINVHMACLKDLASKSHETLTKLYEILMGESQWTPTEVLGEDTSDQLVVSSAEDGDRTPLR

QDEITEEFQHKDEVCNVLEHGREELRKKETDTRVKIAKTNSMWFSYHTVDNLTCAF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	2	221	2.2e-07
NB-ARC [Pfam fs]	24	221	1.5e-25

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPS2 [A. thaliana]	24	272	2e-11
Pib [Oryza sativa].	24	405	3e-40
I2 [L. esculentum]	25	432	8e-18
RPM1 [A. thaliana]	25	651	5e-24
Mla1 [Hordeum vulgare].	25	604	8e-52
Pi-ta [Oryza sativa]	25	461	5e-94
Xa1 [Oryza sativa]	25	485	5e-15
Pi-ta [Oryza sativa]	494	667	2e-24

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3099.m00095

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)