Report for 3104.m00105

 > 3104.m00105, length: 915, copies: 1 

MMRIRCSSSSSGGHGGHQLILCWLVIACSWVAVARAQAQKPAGATTDPVEVAALNTILGRWGTKPPKTWNITGGD

PCTGTAVDDTDIDNNPIVNPGIKCDCTFNNNTVCRIVKLRVYALNVVGQIPAELEKLTHLANLNLMQNYLTGPVP

SFFGKFPMQYLSLAINPLSGPLPKELGNLTNLISLGISLNNFTGNLPEELGNLTKLEQMYIDSSGFSGPFPSTIS

KLKKLKILWISDNDFTGKIPDFIGSLTNLEDLRIGDIVNGSSSLAFISNLTSLNVLILRNCKISDNLGAVNFTKL

SRLNLLLFAEIFRTTNSWETFLHGLPIIIYNLDSGSNRSVRGLDNTVYEADATSLGAASYYVTGQTRWGISNVGK

FNEAPNGSYLMYSSQQFQNALDSELFQTARMSPSSLRYYGLGLENGNYTVLLQFAEFAYPDTKTWQSIGRRVFDI

YVQGDLKEKNFDVRKTAGGKSFIAVNKRYNATVSKNFLEIHLFWAGKGTCCIPTQGYYGPMISALSITPNFTPTV

RNGVPKKKSKAGVIAGIVIGASVIGSAALLGIFVLVKKRRKAARQQEELYNLVGRPNIFSSAELKLATDNFSSQN

VIGEGGYGPVYKGSFFDRGKSEFVTEVATISAVQHKNLVKLYGCCIDSSTPLLVYEYLENGSLDQALFGHGSLNL

DWPTRFEIILGIARGITYLHEESSIRIVHRDIKASNVLLDTDLSPQISDFGLAKLYDEKETHISTKIAGTFGYLA

PEYAMRGHLTEKADVFAFGVVALETVAGRSNTDNSLDNDKIYLFEWAWGLYEREQGIKIVDPKLDEFDSEEAFRV

IYAALLCTQGSPHQRPPMSRVLAILTGDIEMTEMVTKPSYITEWQLRGGNTSYISSNYSSGSTTGEFREQRETSP

LTPSPTITGVTYDGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	134	157	4.7
LRR [Pfam ls]	181	204	5.8
LRR [Pfam ls]	229	252	0.2
LRR [Pfam ls]	277	301	5
Ser/Thr pkinase [Pfam ls]	596	852	5.7e-32
Ser/Thr pkinase [Pfam fs]	620	778	2.9e-37

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	110	133	3.1
LRR [sensitive, ls]	110	133	82
LRR [sensitive, ls]	134	157	0.18
LRR [sensitive, ls]	134	157	4.7
LRR [sensitive, ls]	181	204	0.22
LRR [sensitive, ls]	181	204	5.8
LRR [sensitive, ls]	205	228	1.4
LRR [sensitive, ls]	205	228	38
LRR [sensitive, ls]	229	252	0.0076
LRR [sensitive, ls]	229	252	0.2
LRR [sensitive, ls]	277	301	0.19
LRR [sensitive, ls]	277	301	5

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	70	301	2e-22
Xa21 [O. sativa]	87	259	1e-14
Cf-9 [L. pimpinellifolium]	102	305	1e-12
CLV2 [A. thaliana]	102	248	6e-14
Xa21 [O. sativa]	105	306	3e-19
FLS2 [A.thaliana]	110	255	1e-12
Xa21 [O. sativa]	110	278	2e-20
CLV2 [A. thaliana]	114	318	3e-11
FLS2 [A.thaliana]	114	246	1e-11
Cf-9 [L. pimpinellifolium]	120	294	2e-13
FLS2 [A.thaliana]	120	282	1e-14
FLS2 [A.thaliana]	121	306	1e-22
FLS2 [A.thaliana]	121	259	8e-14
FLS2 [A.thaliana]	121	246	3e-12
CLV2 [A. thaliana]	122	292	1e-12
CLV2 [A. thaliana]	123	292	1e-11
FLS2 [A.thaliana]	123	292	7e-21
FLS2 [A.thaliana]	123	305	4e-20
FLS2 [A.thaliana]	123	281	1e-16
FLS2 [A.thaliana]	123	223	4e-12
FLS2 [A.thaliana]	123	275	2e-11
Xa21 [O. sativa]	123	667	3e-23
Xa21 [O. sativa]	123	287	6e-19
Xa21 [O. sativa]	123	257	8e-16
FLS2 [A.thaliana]	134	280	1e-12
Xa21 [O. sativa]	161	283	1e-12
FLS2 [A.thaliana]	548	850	4e-35
Pto [L. esculentum]	584	860	5e-48
Rpg1 [Hordeum vulgare]	584	847	3e-30
Rpg1 [Hordeum vulgare]	584	847	1e-26

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	539	561	out -> in

Report for 3104.m00105

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)