Report for 3135.m00117

 > 3135.m00117, length: 513, copies: 1 

MAMLVRRDMVSLVKGIASSQGGMEKSQRSDEKRNLLGGANLDVYKAHIWPLALDWSDMAMSLYAPMYADINECDP

SNKDKYPCYGVCKNIVGDYECSCHTGYQPSGGGPKKQECNPKFPVAAQLALGVSLGFSFLVVVVLFTLMMLQRRK

MNEYFKKNGGSILQNVDNIVIFSKDEMKKILKNNSEVIGQGGFGKVYKGRLKDNTLVAVTTSIEVTEAQKEDFTN

EVIIQSRMMHNNIIKLLGCCLEMDVPMLVYEFAANGSLKDILHSDASHLVPLTLDLRLDIAIESAEGLRYMHSSI

SHTIRHGDVKPANILLTDKFVAKISDFGTSKLLTVDKEFTMVVAGSMGYIDPVFYMTGHLTQKSDVFSFGVVLLE

LISRRQTIYGKNRSLIIEFQEAYDQANSGRLLFDKDIAIEEDVLILEEIGRLAMECLNEKIDERPDMKEVVARLM

MLRRSRKLKQENYNISRQQFFEENSIDELPKSFDDNSSSSSAELLSNLATKNSLTYRSTTGRD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	182	451	4.6e-43
Ser/Thr pkinase [Pfam ls]	182	451	1.3e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	135	468	5e-37
Rpg1 [Hordeum vulgare]	172	449	6e-14
Rpg1 [Hordeum vulgare]	183	449	1e-21
Pto [L. esculentum]	188	449	3e-41

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	124	146	in -> out

Report for 3135.m00117

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)