Report for 3160.m00147

 > 3160.m00147, length: 627, copies: 1 

MAYEIEDWIDEAMHHLTKDDSNSGFISKIIFRLNRMRTQNRMANQINEVKTRVVEMSHRHKRYKLDASISTSDYT

AIDPRLCALYADAEALVGMDGPRDEITKWFMGADQQLMVVSVLGIGGLGKTALANEVYKKIGGQFDCHAFISISQ

KPDIMCPPQNNHASRVITTTRIEKVAMECCSYRCEFIYKMKPLNEHDSRRLFFNRIFGSENACPERFKGVSTGIL

QRCGGLPLAIVSVSSLLANPATSVDRQWEYVSNSLSDKFGIMPALDGMRNILHLSYKNLPYHLKTCFLYLGIYPE

DYIIRKSDVVRQWITEGFVHKAQVQDAEDVAGSYFNELVNRSMILPTDIDYQNNVVSLFSDAVHQMSLDLTGIRQ

LFQLRYVKIEANIHVQIQLPAQIQELKLLESIDIEWGSVCIPPDIVHLPHLIHLVIPEGTGLPDGIGNLKSLITL

RSFDLGENSLHNIRSIRELTNLKDLNLCYSGKNVVSNMETWIDVLRSSLEKLSNLKYLHLYWPGTCENGLCSLNP

PSRHLQRLEMAYWWFSKVPKWIGGLHELHVLKLAVKEVSDDDITLLAQLPSLTNLGLRMRGAPKQKIIIYKKAFP

VLRYFKFWCSTPCLVFEASVMSEELRN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	76	150	5.8e-15
NB-ARC [Pfam ls]	76	324	4.9e-21
NB-ARC [Pfam fs]	155	324	1.6e-26

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	626	4e-61
Pi-ta [Oryza sativa]	1	621	8e-71
RPM1 [A. thaliana]	158	577	2e-21
RPS2 [A. thaliana]	158	585	9e-13
Pib [Oryza sativa].	158	509	2e-29
I2 [L. esculentum]	159	583	6e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3160.m00147

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)