Report for 3165.m00134

 > 3165.m00134, length: 894, copies: 2 

MTASVVSSVLQRLGDLVIQEATFLSDVPRQVSSMKAELSQMQCFLNVVDAKCLEGNSMMKNLASNIQDVAYRVEE

VIDNAHFIFRRRKTSVSKYTHIFGDSIDLREVGKNIQVIRKEISEIFERYNRYNAVNSSTSTEAQPIFREDEDFY

AQRLVPPGLDQGMDIVGFDHEIAQIKSYLLDQNNMNLTVISIVGQAGAGKSTLAKLAYSSVITEGYFHKYGWVSI

SPKYSALEVLRDLVRQIRGTGKISERKSMHLNFYGETEVSKLIFDFLKEERYLIVLDDIWTTDTWDKIKSVFPDK

GNGSRIILTTRDMEVGQHPKTKVQIHTPDLLDEDKSWELFQKKAFPHDVQFTELEVVGKKLSKKCNGLPLALVVL

GCFLSRNHNIHTWEKMVASVDWEIMKKEGDVGRILALSYHNMSNNLKACFLYTASFPEDYPITVHVLKKMWIAEG

FVPNIRGYTQEEVAYRYVEELAQRCMIQIEERSKNIGWIKKIKVHDVLREWGIGQARKEGFLKVCSSGTDVETYY

ADEQRCYRVAFHGYFDNEVGKSVLNLRSVLAFNPDGKRLFSFNGLHLLRVLHFCSSLKTCTLPEEINKLVHLRYL

GLEGSTVFMFPSYMKGLRNLQILEASTATVKALPSSLWSIAALKHVHVYQVLHWKAQEIRTKRSLQTLYVFSIMQ

CDALTWKRTIRSLQKMSQHVSWCLGIASTKRVKEKETQEHEEYNLDIRVDALESKVDGLELSGCFKERHVLNDVL

PHHNLFPNFLLQLKISCPNILNDDPMPILERLPRLEVLEIVNSSYTGKRITCSSEGFLALRSLVLMDIGLEEWNL

QQGSMAFLAVLTLKCTMLRSISNVLHQLDDLVELRLICMPQLSVDDHEPARGRGCRVMISVDEEQTSDT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	144	457	6.4e-78
NB-ARC [Pfam fs]	163	457	2.2e-78

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
RPM1 [A. thaliana]	1	879	1e-67
Mla1 [Hordeum vulgare].	1	649	7e-46
Pib [Oryza sativa].	54	315	1e-13
Pi-ta [Oryza sativa]	63	653	5e-38
N [N. glutinosa]	123	431	3e-15
Pib [Oryza sativa].	158	647	1e-50
I2 [L. esculentum]	159	790	5e-49
L6 [L. usitatissimum]	164	512	2e-12
M [L. usitatissimum]	164	509	5e-16
RPS2 [A. thaliana]	165	624	7e-32
Xa1 [Oryza sativa]	165	711	1e-35

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3165.m00134

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)