Report for 3178.m00175

 > 3178.m00175, length: 735, copies: 1 

MAVVGLEAGRKGSNGSAKGAGSGGSSSSLSICTLALPGAPPLLCGEFLCWIEAAAGYAFCFISCQQFKLRPSSIY

LKQERSYCIIMDLSESKHKEYIERAQWIEENISNIKPFTEEDIKRITSDYNTNLGNGGFGKVYKGVLDDNHFVAV

KKYIKMDSEEMFAQEVRVHSQINHKNVVRLIGYCIEKNAPMMVMEYVPNRDLDYHLHDKNSLDSLDIRLDIAIEC

ADALGYLHSMCSPVLHGDVKPSNILLDDNFNAKITDFGISRLLSTDKTHTVKCIGSIGYVDPLYCREGRLTSKSD

VYSFGIVLQELITKKKAASLAQALAEGKGVTELLDPKICNESNMKVLVEIGKLLQECLTEDIHRRPDMCDLAGHL

RMLRKFCLRQPAPLENFGWHLFPETQNEDKEQSQQGTNNVSSSLMAFPKMAGIFNRNMYKSRKKGTPLYISGKRM

FTAREIKVITNNNSTIIGRGAFGNVYLGILENYRKVAVKTYIKGTEHEEDRCGKELNLPELIHKNIIQLLGFCCK

LDAVILVYEFANKGSLYDILHGTSNFPFPLDLRLDIAVGSAEGLAYMHSRSKPILHGDVKTTHILFDDNIVPKIS

GFGSSQIGEDSTWVVAADINYIDRRYIQTGLFTRKSDIYSFGVVLLELITRKRILDSKKCSLVVEYVNCYEKENS

GRIMFDNEITAEENMATLEAIGILAMKCLSDNIDERPEMREVAEQLVMLKMAWKQLKGNI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	123	377	4.3e-46
Ser/Thr pkinase [Pfam fs]	129	314	4.1e-47
Ser/Thr pkinase [Pfam ls]	461	723	1.5e-22
Ser/Thr pkinase [Pfam fs]	466	605	8.7e-21
Ser/Thr pkinase [Pfam fs]	632	659	0.0007

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	110	406	5e-32
Rpg1 [Hordeum vulgare]	111	316	8e-27
Pto [L. esculentum]	113	371	1e-39
Rpg1 [Hordeum vulgare]	113	721	4e-42
FLS2 [A.thaliana]	449	725	1e-22
Pto [L. esculentum]	451	721	2e-35

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3178.m00175

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)