Report for 3186.m00148

 > 3186.m00148, length: 761, copies: 1 

MTCRRQRRRRRTSPAAPAPPPVLPPDNDDLIQEILLRLPSHPSSLPRASLVCKQWRRLVSDPAFLRRFRARHRDP

PLLGVFKDELHHPVFRSVLDPPDLIPPDRFALRLDDYRAASLLGCRHGLVLIFNYNTCEFLVWDPVSGDRRRVAV

PQELDGGERSVMNGAVLCAAGDDGHVHGGGFRSCHFKVVLIGASKMDGRIFASIYSSVTGEWGDAIFTGPVSTIY

YFGSPAILVGNSLYWLLSVWGPHILEFNLETSTLAVIDGNWPQMNFSSDCHYCIMRGEDGNVGLAILSYRGFQMW

ERKVTLGGAAKWVLWKTVKLHDILGLSSAVQREKTDIVGYSEDPNAFILVVDTDFYMFRVDSMQSKKLFDCNVVT

RCHPFTSFYTAGLDMEHVVSAVTGELVTRFISYLMSKYSRRHEISEEKQLKRLQQLLLRVSMVVEEADGRYITNS

GMLMQLKALADAMYRGHHVLDMFRCRTLIQEDPIKEVSNPFPPLKRFCKIVDASGKDKARHLELHRTLEILETAV

DHMAEFVVLLGGCDRMSRRPYDTYLYIDNFMFGRHSEKQRLLNFLLEYNPPGVQPAVLPIIGALGVGKKTLVAHV

CADERVQSQFSSILHLNEGDLLGIAHNHTLLAGNILMVVEFVSDVNEMNWEEFYKSVAQMNEGSKVVTISRLRKS

EKLGTVKPMFLNNHSDEELSYLFKMLAFGSANPKDHPRLVQISEENCHADAVHRDTCRSKCYCRCIEREFGCQFL

AWQIKNVHYTD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	539	610	1.3e-05

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	382	720	1e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value
F-box domain	18	70	1.3e-06

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	224	246	in -> out

Report for 3186.m00148

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)