Report for 3220.m00121

 > 3220.m00121, length: 620, copies: 1 

MSVAQSKERGNPAARGVEEDILVPLLARLATIRTVLDNAPAPSRRRLPVHVRDAEEDARVEARALLEKVQGEMSY

LQRVFRRIDEAENSILYGFDPVEEQIDDALQQAQVGLDVEQVHEALLAVDADIEVIKASIREVYRFPCDGDERRG

PPPPSTAPATGVVMTRRMGEIRRGPQMRHLGLAIGGFEARLRGCVLTLAAFPECAVIKKRLLIHWWLGEGFVRSA

AEGKSRFDELIAKGLIVPIPGHLCATVHRCTVRPWMRDLLTGVAKRTAFLDLDSGNDFTLARRACLNAGRMSSGF

SAEARAIYNIDQKYLELDDAWFAGKKELRALQLGQWREFGPLEQIANPMDSHIELSGVEHLADMESCKNLRYISF

RGISRIESLPDSIGRLRELTVLDLRACHNLEELGQGITRLDRLGYLDLSECHLLVGMPKGIGRLTRLEVLKGFVV

ANPSRREPCHLNELTKLNKLRKLGIVIGTMAVPTDDEFMKLGEFRALESLKIRWGVLASDSKGKIEASSHQKPID

KMKFALPPNLKKLDLRCFPLTDFAQWVTPKGVKKLYIRGGKLMTLGDEQGWEAEVLRLRFLNDLEYDHDRLKRSF

RKLKPENTEIHACPKFIRGQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	191	227	6.7e-07

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	369	392	1.8
LRR [sensitive, ls]	369	392	19
LRR [sensitive, ls]	393	416	1.4
LRR [sensitive, ls]	393	416	15
LRR [sensitive, ls]	417	440	0.55
LRR [sensitive, ls]	417	440	6

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	178	502	2e-17
Pib [Oryza sativa].	186	421	4e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3220.m00121

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)