Report for 3220.m00125

 > 3220.m00125, length: 648, copies: 1 

MSTPEAEAEGEGGCILFSKYIDDGILTPLLSSLQVIGDAKSFRGAESSSDLAQLDSIRDMMRELQAIFVKMGENE

RRIVHLFDPIEELVDDVLNSLAAGGEISTLQPKLAGVGVQIGIIREAISGSYKIKIQEEPSPDRGRDVEDSASAP

TMAGIRRCVRDGEQMAHLRRAVHGMDEQLRHCLLCLAAFPEGAVIKKRLLIHWWIGEKFVSSLEDGNELFQQLVD

LRFVRTVRRRGHCDTAHACTVHPWIRRMLVAVARSSAFLEIDPDGNGASASNNDFSRTHRACLHDGGLLQGSRFH

PQLSTIYNVGQSYVKLSTAWFTYRSQLGTVQLGQWRVADPVDQIAYPRKSHIELIDDHHLKGIGACKNLRYLSLR

GISRIMAIPAAIGELAELVVLDLRACHDLQVLAKEITKLQKLQYLDVSECYLLVDMPEGFNKMSQLQVLKGFLVV

NSNKRNTCNLGELVSLSNLRKLSISVSKKLKRAEDELKVLANFASLASLKITWGMVSPRDAADESDAAKFNLVLP

SNLSKLDLYCFPSRQFGTISSDSLKKLYFTGGKLHSLEIQNGECKVEVLRLRCLKDLQFCWEELRELYPMLEFVE

AQHCSGVANWPLDNNKVWTKDAETSNAASAQSEEPTAPDVCPEIVEEG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	177	215	5.1e-09
LRR [Pfam ls]	416	439	0.85

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	368	391	2.1
LRR [sensitive, ls]	368	391	23
LRR [sensitive, ls]	392	415	1.2
LRR [sensitive, ls]	392	415	13
LRR [sensitive, ls]	416	439	0.078
LRR [sensitive, ls]	416	439	0.85
LRR [sensitive, ls]	468	491	3.8
LRR [sensitive, ls]	468	491	42

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	108	501	4e-16
Pib [Oryza sativa].	168	420	9e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3220.m00125

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)