Report for 3230.m00124

 > 3230.m00124, length: 849, copies: 1 

MATLASCPKSCGQMSIHYPFGIGAGCFRQPDFNLICDNSTQPPKLLLHDGTTEVVGDEDSLRRTRYPVRGVRIWR

SDSSIGMDVGLSEWIDINISATIPMVPGVAEYNYSWNLSSFSIFDASLNITGCEFDTYIINNKSYSPTTAICKSS

CPNKEITETVARQSCNGTGCCTIYVGIDVANLHLRFVRHGREGFLGVNSSRSSLWNRINIVSSYASVMWGINNRP

TCASVKDQNQTDYACASANSQCVDSISSTDLGYRCECNSGYIGNPYVLDGCTRDEVLNVSSASGEVYELCSLKAG

YHPVQQKANCSRWCGNISVPFPFGLEEGCTARKLFELNCTNVTSSTLQFNRGHVVTDIDLAEGVVGIKLITSYYV

EQVFRMYISGEPYLYASFGEAVISVHWAAANLTCQEAQKNHSRYACVSANSTCLGVNSTDGYVGYRCKCMDGFHG

NPYDANGCEDVDECKKTPGIFKGICHNNIGSYQCMECLDKTEYDVTAMQCVSRKKQNLLIGIVIGLSVGFTILLF

VMSGMLLLRRWKRDIQRQLRRNYFRKNQGLLLEQLISSDENASDKTKIFSLEELEKATNNFDPTRILGRGGHGMV

YKGILSDQRVVAIKKSKIIKQDEIDNFINEVAILSQINHRNIVRLFGCCLETEVPLLVYDFIPNGSLFGTLHADA

STFGYLDPEYYHTGQLNKKSDVYSFGVVLIELLLRKEPIFTSETGLKQNLSNYFLWEKKVKLIRDIVADQVLEEA

TEEEIHTVASLAEDCLSLRRDEIPTMKQVEWALQFLLNKRLNSYCTVQANKEEMDPFIMTKVQHSTENSNVEFLS

NKATISSYQPGLEHEFMSSATIPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	586	668	1e-17
Ser/Thr pkinase [Pfam ls]	586	785	2.1e-09
Ser/Thr pkinase [Pfam fs]	693	713	0.00043

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	563	787	2e-24
FLS2 [A.thaliana]	564	681	8e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	511	533	out -> in

Report for 3230.m00124

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)