Report for 3311.m00120

 > 3311.m00120, length: 462, copies: 2 

MAIVLDVFASYVGNLLKQVAKDELNLLFGVSLEIATLHDKLRILKDYLADADRRRITDLSVQGWVTKLKHTIRIK

ALNARLDAICKSAATFSFLKLESYEDMVAPRRFSVANRRTDPVLEQSAVVGEKIKEDTRALVRRLTDGKHKKQDA

VMVVAMAIKEASDKKIWLSVTQDVNEVNLLRTAIKSVGGASDGRESNKSLLVLALVDAIRDKRFFLVLDDVWSER

SWDNLLKAPFSHGAAGSHLLITTRHDEVTQRMEAMQPFHHVDKLYPQYAWLLLKKQVASSDDMEEVEIDDTLKDI

GMEIIKKCGGLPLAVKYLEIEFENLVRLPNSLVKLGRLRHPSLVKLGRLRHLDLLGVSINGIPRQFCGLTNLRYL

CGFPAQADGLQDVSPMHLVLDCNLELLTSIALGESGPEWGKLSHVQHIKAYADQRDDERKWHMLYTREPYSFETN

IGDNSSSSTGVN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	109	405	1.2e-11
NB-ARC [Pfam fs]	163	318	1.3e-24

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	158	363	3e-13

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3311.m00120

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)