Report for 3319.m00121

 > 3319.m00121, length: 505, copies: 1 

MHDLIDRLEWHSHKETEAGHLRQIKDVVYDAEDLLDEYNYYALKVKVKASKNLGQDHLHEPFLEFLGNVNFSGKF

RKVMEIQERLKHVFDQSNSLGLHKTPKKFDKIVRPETCHVLDEPDEIFGREKELEDLKQKLRVRGHKRGRPVACN

TTAEARRTELLVLPIVGMGGVGKTTMAQQICVDGVVRNHFNNCIIWICVSDEFEVNRLTRDVLKSLGVKLQDSDT

RDTLMVNLRDSVKSKKFLLVLDDMWDDVLKDEKGWRTFHRTLSNGLEGSMILVTTRSSKVANLVSNSNHYELKGL

QHGVFWNFFKLCAFGSVQSWSNSCRNRPELERIGEAILPKLKGSPLAAKTLGHLLKSNLSIEHWEDILKSELWRL

EQEETDILPALRLSYVYLPQDIKRCFSICAMYPKDHKFEKDFLADISVAQGYVELENAPSCFDDLLNRSFFQKAA

GEHGTYVIHDLMHDTAQLVSKDECFIIQHSLSFFEPQFPDSEESKNVCHLEVLEI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	104	433	1.7e-51
NB-ARC [Pfam fs]	155	433	1.5e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	16	477	2e-12
I2 [L. esculentum]	21	480	3e-66
Mla1 [Hordeum vulgare].	23	476	6e-25
Xa1 [Oryza sativa]	80	504	9e-58
Pib [Oryza sativa].	90	478	2e-17
RPS2 [A. thaliana]	145	428	4e-22
RPM1 [A. thaliana]	161	475	1e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3319.m00121

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)