Report for 3341.m00145

 > 3341.m00145, length: 1073, copies: 1 

MVCAAIHIAVVAMLVSLTALAIADESDNNQREALLCIKSHLSSPEGGALTTWNNTSLDMCTWRGVTCSSELPKPR

LVVALDMEAQGLSGEIPPCISNLSSLTRIHLPNNGLSGGLASAADVAGLRYLNLSFNAIGGAIPKRLGTLRNLSS

LDLTNNNIHGEIPPLLGSSSALESVGLADNYLTGGIPLFLANASSLRYLSLKNNSLYGSIPAALFNSSTIREIYL

GENNLSGAIPPVTIFPSQITNLDLTTNSLTGGIPPSLGNLSSLTALLAAENQLQGSIPDFSKLSALRYLDLSYNN

LSGTVNPSVYNMSSITFLGLANNNLEGIMPPGIGNTLPNIQVLIMSDNHFHGEIPKSLANASNMQFLYLANNSLR

GVIPSFGLMTDLRVVMLYSNQLEAGDWAFLSSLKNCSNLQKLHFGENNLRGDMPSSVAELPKTLTSLALPSNYIS

GTIPLEIGNLSSISLLYLGNNLLTGSIPHTLGQLNNLVVLSLSQNIFSGEIPQSIGNLNRLTELYLAENQLTGRI

PATLSRCQQLLALNLSCNALTGSISGDMFIKLNQLSWLLDLSHNQFINSIPLELGSLINLASLNISHNKLTGRIP

STLGSCVRLESLRVGGNFLEGSIPQSLANLRGTKVLDFSQNNLSGAIPDFFGTFTSLQYLNMSYNNFEGPIPVDG

IFADRNKVFVQGNPHLCTNVPMDELTVCSASASKRKNKLIIPMLAAFSSIILLSSILGLYFLIVNVFLKRKWKSN

EHMDHTYMELKTLTYSDVSKATNNFSAANIVGSGHFGTVYRGILHTEDTMVAVKVFKLDQCGALDSFMAECKALK

NIRHRNLVKVITACSTYDPMGSEFKALVFEYMANGSLESRLHTKFDRCGDLSLGERISIAFDIASALEYLHNQCI

PPVVHCDLKPSNVLFNNDDVACVCDFGLARSIRVYSSGTQSISTSMAGPRGSIGYIAPEYGMGSQISTEGDVYSY

GIILLEMLTGRHPTNEIFTDGLTLRMYVNASLSQIKDILDPRLIPEMTEQPSNHTLQLHEHKKTVPSRCKLGGVE

GILTCTIREIASKLGGLRLSMLT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	123	146	0.14
LRR [Pfam ls]	147	170	0.042
LRR [Pfam ls]	195	218	0.89
LRR [Pfam ls]	219	241	5.3
LRR [Pfam ls]	243	266	0.054
LRR [Pfam ls]	267	289	2.4
LRR [Pfam ls]	290	313	0.099
LRR [Pfam ls]	314	338	5.5
LRR [Pfam ls]	339	362	1.4
LRR [Pfam ls]	363	385	0.11
LRR [Pfam ls]	413	436	1
LRR [Pfam ls]	438	461	5.1
LRR [Pfam ls]	462	485	0.85
LRR [Pfam ls]	486	509	0.13
LRR [Pfam ls]	510	533	0.3
LRR [Pfam ls]	534	558	0.19
LRR [Pfam ls]	584	607	0.046
LRR [Pfam ls]	608	631	0.19
LRR [Pfam ls]	632	655	0.56
LRR [Pfam ls]	656	677	3.6
Ser/Thr pkinase [Pfam fs]	775	989	3.9e-56
Ser/Thr pkinase [Pfam ls]	775	1039	3.4e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	100	122	1.2
LRR [sensitive, ls]	100	122	28
LRR [sensitive, ls]	123	146	0.006
LRR [sensitive, ls]	123	146	0.14
LRR [sensitive, ls]	147	170	0.0018
LRR [sensitive, ls]	147	170	0.042
LRR [sensitive, ls]	171	194	0.72
LRR [sensitive, ls]	171	194	17
LRR [sensitive, ls]	195	218	0.038
LRR [sensitive, ls]	195	218	0.89
LRR [sensitive, ls]	219	241	0.23
LRR [sensitive, ls]	219	241	5.3
LRR [sensitive, ls]	243	266	0.0023
LRR [sensitive, ls]	243	266	0.054
LRR [sensitive, ls]	267	289	0.1
LRR [sensitive, ls]	267	289	2.4
LRR [sensitive, ls]	290	313	0.0042
LRR [sensitive, ls]	290	313	0.099
LRR [sensitive, ls]	314	338	0.23
LRR [sensitive, ls]	314	338	5.5
LRR [sensitive, ls]	339	362	0.062
LRR [sensitive, ls]	339	362	1.4
LRR [sensitive, ls]	363	385	0.0046
LRR [sensitive, ls]	363	385	0.11
LRR [sensitive, ls]	386	412	1.2
LRR [sensitive, ls]	386	412	29
LRR [sensitive, ls]	413	436	0.043
LRR [sensitive, ls]	413	436	1
LRR [sensitive, ls]	438	461	0.22
LRR [sensitive, ls]	438	461	5.1
LRR [sensitive, ls]	462	485	0.036
LRR [sensitive, ls]	462	485	0.85
LRR [sensitive, ls]	486	509	0.0054
LRR [sensitive, ls]	486	509	0.13
LRR [sensitive, ls]	510	533	0.013
LRR [sensitive, ls]	510	533	0.3
LRR [sensitive, ls]	534	558	0.0082
LRR [sensitive, ls]	534	558	0.19
LRR [sensitive, ls]	584	607	0.002
LRR [sensitive, ls]	584	607	0.046
LRR [sensitive, ls]	608	631	0.0083
LRR [sensitive, ls]	608	631	0.19
LRR [sensitive, ls]	632	655	0.024
LRR [sensitive, ls]	632	655	0.56
LRR [sensitive, ls]	656	677	0.15
LRR [sensitive, ls]	656	677	3.6

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	20	672	9e-88
CLV2 [A. thaliana]	48	749	2e-53
Cf-9 [L. pimpinellifolium]	51	691	4e-63
FLS2 [A.thaliana]	66	187	3e-11
Cf-9 [L. pimpinellifolium]	68	376	6e-24
FLS2 [A.thaliana]	70	1007	1e-135
CLV2 [A. thaliana]	150	672	5e-54
Xa21 [O. sativa]	151	883	1e-146
FLS2 [A.thaliana]	460	674	9e-24
Rpg1 [Hordeum vulgare]	764	986	7e-15
Pto [L. esculentum]	767	1012	1e-25
Rpg1 [Hordeum vulgare]	772	986	2e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	721	743	out -> in

Report for 3341.m00145

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)