Report for 3354.m00180

 > 3354.m00180, length: 718, copies: 1 

MEGFGENIMVSALAGMMSPLLGKLSYLIEKEYAELKGVRKKLEQLRKELMAINLVLEKYASMENYDLQLKAWMIE

MHELAYDMEDIIDLFTYRIDHEPASTTVGVKRIILKILRKVRKIHHRHKFAKQIHQLQVLVNEAYKQQKRYRLEE

GISSKPHTEIDPRLPALYVEVEKLLGVEGPSKEIMEQLIGEKPTRQHRVVSAVGSGGSGKTTLVKQVYERIKGQF

SCSAFLSVSQKPNINNLLRELLSRIWDGSGSSGATELYSDKQLIDKLRACLDNERYLVVIDDIWQRSAWETIHCA

LPKNNHASRIIITTRIKSVAQFCTSAEGFVYQMKPLNKSDSESLFLRRTFGAEENCPSQLEGVINKILYICDGLP

LAIITLASLLADKPRREEEWERVLNYMGSMPKKDSELEVMDKILSLSYNDLPHHMKNCFLYLGTFPEDHDIGKDI

LVWKWIAEGFIVAKQGFTLEEIAESYFYELINRSLVQPVNMLHGVSEHGCRVHDIVLSFIISRSTEENIFTMLDD

QELPSSKTRIRRLSIWNKQQYPTFISQESMKLSHVRAISICHVDGWTIPPDLDLPVLRVLDLEGCSALRNAHLDC

IPSLFHLRYLGLSRTSIDSLPAQIGKLEYLQTLDVRSTLVRRLPESILHPKRLMRLVGDELILLDGFGNMESLQE

LGIVDGCNCSISFLITPRLTSHFCKASSVHISSCTAARFFGGY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	159	466	2.1e-62
NB-ARC [Pfam ls]	159	466	1e-62
LRR [Pfam ls]	606	628	3

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	581	605	2.9
LRR [sensitive, ls]	581	605	59
LRR [sensitive, ls]	606	628	0.14
LRR [sensitive, ls]	606	628	3
LRR [sensitive, ls]	629	652	1.8
LRR [sensitive, ls]	629	652	37

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	13	689	1e-110
RPM1 [A. thaliana]	21	657	1e-70
Pi-ta [Oryza sativa]	36	665	2e-69
I2 [L. esculentum]	40	675	7e-44
Pib [Oryza sativa].	50	337	3e-13
Xa1 [Oryza sativa]	130	677	8e-32
Pib [Oryza sativa].	149	653	4e-66
L6 [L. usitatissimum]	167	440	6e-14
M [L. usitatissimum]	169	440	9e-14
RPS2 [A. thaliana]	169	656	3e-29
N [N. glutinosa]	198	440	2e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	27	59

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3354.m00180

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)