Report for 3354.m00181

 > 3354.m00181, length: 763, copies: 1 

KLEEGSSSNSFVEIDPRLPALYVEVQKLVGIEGPSKEIIEQLIGEEPTWHRRVVSVVGSGGSAFVSVSQKPNINN

LLRELLSRIGSNSESLGARELYSDQQLIDKLRACLENERYLVVIDDIWQKSAWETIQCALPKNNHASRIITTTRI

KSVGQFCCTSDEGFVYQMKPLTKSDSENLFLKRTFSSEENSPSQLQEVINKILYKCDGLPLAIITLASLLADKPR

RKEEWERVLNYIGSMPKKDSKLEVMDKILSLSYNDLPHHMKNCFLYLSTFPEDHEIRKDILVWKWIAEGFIITKQ

GFTLEEVAESYFYELINRSLVQPVNMVHGAIEQGCKVHDIVLNFIISRSVEDNFLTMVDGQELPSPKSRIRRLSV

WNKQEFPRFISKGSMNLPYIRAISICHIDGWTMPSVLNLPVLRVLDLEGCRALRNDHLDCIVSLFHLKYLRLSKT

SIDRLPAQIGKLEYLQMLDVSSTQVRLLPESVIQLKRLMRLVGNELILSDGFANMESLQELGVLDACNCSINFGK

DLELLSNLRVLRIMFRCEEITSDPDARKKSLMSSLCKLGGNSLRSLYYQSSTTGVDCSADSWCPPPILLQKFEYR

GVRYFSSFPKWIKHSLVDLAYLDFRIERMERKDLHVLESLPALTVLCVTVKRVPEDGLMIRHGAFQCLTRLEFCN

TDGPGLTFEADMTRLEWLKLEFNADKAQATYGSLVVGIQHLCSLKCIDLTIGMLSEDENDPPKEIIKSVIGDKIK

MLPHNPKVNITFL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	13	301	3.1e-47
NB-ARC [Pfam fs]	63	301	2.3e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	416	440	4.1
LRR [sensitive, ls]	416	440	85
LRR [sensitive, ls]	441	463	0.29
LRR [sensitive, ls]	441	463	6
LRR [sensitive, ls]	464	486	2.2
LRR [sensitive, ls]	464	486	46
LRR [sensitive, ls]	510	534	4.9
LRR [sensitive, ls]	510	534	100

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	12	667	1e-94
I2 [L. esculentum]	13	673	7e-38
RPM1 [A. thaliana]	20	646	5e-59
RPS2 [A. thaliana]	23	491	3e-27
Pi-ta [Oryza sativa]	27	538	3e-57
Xa1 [Oryza sativa]	37	512	2e-25
Pib [Oryza sativa].	79	519	2e-62

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 3354.m00181

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)