Report for 3378.m00136

 > 3378.m00136, length: 713, copies: 2 

MEVTAGAMRALLPKLAKLLKDEYNLEKHVREGVKSLEIELTMMHAALRKVAEVPLDQLDDQVKIWASKVREISYD

MEDAGDAFMVRVEDDSHSGPSTFKNRVKRPIKKISKLFRKAKELHQIADAIKEAQALAQQMAGLRERYSGLELQN

SGMVTSTIDPRLTALYIDATDLVGIDHAREELIKTLTEGEDSSKQQLKIISIVGFGGPGKTTLARAVHEKIEAQF

DCSAFVSVSRNPDVRMIFKKMLHQLDKVKYANINESSRDEIQLIDELREFLQDKRYFIIIDDLWDERVWDYIKCA

FPKDNLGSRLIITTRNVNVSKACCSANNDIIYKMKPLSEDDSKKLFYKRIFPHGNGCPCELEEVSNEILKKCGGV

PLAIITIASLLANKELQTKDQWFTLHNSIGRGLTEGRNVEDMQKILSFSYYDLPSHLKSCLLCLSVFPEDYEIRR

NRLIWRWIAEGFVQQTQNGGSLFEQGENYFNELVNRSMIQPIDIDAEGRAKACRVHDMVLDLICHMSSQQNFITV

FNDIGNITCSRNKTCGLIKCDRGIYKSLENWQHRGACSGEICGQHQRLPTRDRVPSMFPRGAMPRVRYLEFSLRA

WDNDMAIGNGSSGDLDLAMGHLPSLERVSVTLLVHELAGSIFLEIDITIDNMSMYAELAVIGFVSNDRNRMDALH

SSGDDVETKLTISTYFDMVIVGFIYFVSVLSLQVAQCF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	157	468	4.8e-74
NB-ARC [Pfam ls]	157	468	1.3e-74

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	1	645	1e-140
Pi-ta [Oryza sativa]	8	522	2e-72
I2 [L. esculentum]	20	519	2e-44
Pib [Oryza sativa].	62	349	4e-18
RPM1 [A. thaliana]	65	528	1e-50
N [N. glutinosa]	106	391	2e-13
L6 [L. usitatissimum]	111	442	9e-17
Xa1 [Oryza sativa]	120	525	4e-27
RPS2 [A. thaliana]	127	520	7e-24
M [L. usitatissimum]	167	442	5e-17
Pib [Oryza sativa].	191	523	2e-47

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	121	147

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	685	707	out -> in

Report for 3378.m00136

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)